Variant report
Variant | rs6043887 |
---|---|
Chromosome Location | chr20:16300975-16300976 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr20:16262600-16346200 | Weak transcription | Gastric | stomach |
2 | chr20:16270800-16302400 | Weak transcription | Brain Hippocampus Middle | brain |
3 | chr20:16276400-16348200 | Weak transcription | Colon Smooth Muscle | Colon |
4 | chr20:16284400-16313600 | Weak transcription | Primary hematopoietic stem cells | blood |
5 | chr20:16284600-16313600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
6 | chr20:16284800-16302400 | Weak transcription | Brain Substantia Nigra | brain |
7 | chr20:16284800-16302800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
8 | chr20:16285400-16330000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
9 | chr20:16287000-16315200 | Weak transcription | Primary T cells fromperipheralblood | blood |
10 | chr20:16288000-16332400 | Weak transcription | Brain Cingulate Gyrus | brain |
11 | chr20:16288400-16318200 | Weak transcription | Pancreas | Pancrea |
12 | chr20:16288800-16313800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
13 | chr20:16288800-16318600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
14 | chr20:16289200-16313800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
15 | chr20:16289400-16348000 | Weak transcription | Colonic Mucosa | Colon |
16 | chr20:16289800-16302200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
17 | chr20:16289800-16323200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
18 | chr20:16290000-16311200 | Weak transcription | Primary T cells from cord blood | blood |
19 | chr20:16290000-16313600 | Weak transcription | Rectal Smooth Muscle | rectum |
20 | chr20:16290400-16313800 | Weak transcription | Spleen | Spleen |
21 | chr20:16291200-16312800 | Weak transcription | Aorta | Aorta |
22 | chr20:16291200-16313600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
23 | chr20:16291200-16314400 | Weak transcription | Duodenum Mucosa | Duodenum |
24 | chr20:16291200-16317800 | Weak transcription | Esophagus | oesophagus |
25 | chr20:16291400-16331000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
26 | chr20:16292400-16309000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
27 | chr20:16293200-16314800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
28 | chr20:16294000-16318200 | Weak transcription | Fetal Stomach | stomach |
29 | chr20:16295600-16313600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
30 | chr20:16295600-16318600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
31 | chr20:16295600-16349000 | Weak transcription | HepG2 | liver |
32 | chr20:16295800-16315200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
33 | chr20:16296200-16315400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
34 | chr20:16296400-16308200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
35 | chr20:16296400-16311600 | Weak transcription | Stomach Smooth Muscle | stomach |
36 | chr20:16296400-16312200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
37 | chr20:16296600-16313800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
38 | chr20:16296600-16345200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
39 | chr20:16296800-16318200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
40 | chr20:16298600-16301200 | Weak transcription | Lung | lung |
41 | chr20:16298600-16313400 | Weak transcription | Ovary | ovary |
42 | chr20:16298800-16333400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
43 | chr20:16299200-16302000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
44 | chr20:16299200-16302000 | Weak transcription | GM12878-XiMat | blood |
45 | chr20:16299200-16308200 | Weak transcription | Psoas Muscle | Psoas |
46 | chr20:16299200-16311600 | Weak transcription | Left Ventricle | heart |
47 | chr20:16299200-16313000 | Weak transcription | Adipose Nuclei | Adipose |
48 | chr20:16299400-16302000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
49 | chr20:16300400-16301200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
50 | chr20:16300400-16301400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |