Variant report

Variant	rs60474733
Chromosome Location	chr3:75485246-75485247
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr3:75484999-75485288	GM12878	blood:	n/a	chr3:75485139-75485155
2	POLR2A	chr3:75483591-75485454	GM15510	blood:	n/a	n/a
3	USF1	chr3:75484633-75485645	HepG2	liver:	n/a	chr3:75485139-75485155 chr3:75484864-75484880
4	SP1	chr3:75483375-75485442	GM12878	blood:	n/a	chr3:75485205-75485217 chr3:75484994-75485003 chr3:75484744-75484753 chr3:75484357-75484369 chr3:75485149-75485158 chr3:75484408-75484420 chr3:75484846-75484858 chr3:75484264-75484276 chr3:75484357-75484369 chr3:75484897-75484909 chr3:75484266-75484275 chr3:75484827-75484836 chr3:75484825-75484837 chr3:75484408-75484419 chr3:75485147-75485158 chr3:75484847-75484856 chr3:75484359-75484368 chr3:75484354-75484368 chr3:75484846-75484858 chr3:75484734-75484743 chr3:75485147-75485159 chr3:75484410-75484419 chr3:75485207-75485216 chr3:75484357-75484368 chr3:75484994-75485003 chr3:75484358-75484368 chr3:75484396-75484408 chr3:75484408-75484420 chr3:75485205-75485216 chr3:75484398-75484407 chr3:75484732-75484744 chr3:75484729-75484743 chr3:75484396-75484407 chr3:75484359-75484368 chr3:75484825-75484837 chr3:75484265-75484274 chr3:75484993-75485002 chr3:75484848-75484857 chr3:75484993-75485003 chr3:75484732-75484744 chr3:75484264-75484276 chr3:75484397-75484406 chr3:75485147-75485159 chr3:75484358-75484368 chr3:75484743-75484755 chr3:75484894-75484908 chr3:75484265-75484275 chr3:75485175-75485184 chr3:75484358-75484367 chr3:75484743-75484755 chr3:75485037-75485046 chr3:75484265-75484275 chr3:75484992-75485004 chr3:75484843-75484857 chr3:75485205-75485217 chr3:75485206-75485215 chr3:75484322-75484334 chr3:75485202-75485216 chr3:75484745-75484754 chr3:75484733-75484742 chr3:75484992-75485004
5	POLR2A	chr3:75484008-75485452	HepG2	liver:	n/a	n/a
6	POLR2A	chr3:75484835-75485439	HepG2	liver:	n/a	n/a
7	IRF4	chr3:75484328-75485372	GM12878	blood:	n/a	n/a
8	SP1	chr3:75483843-75485286	A549	lung:	n/a	chr3:75485205-75485217 chr3:75484994-75485003 chr3:75484744-75484753 chr3:75484357-75484369 chr3:75485149-75485158 chr3:75484408-75484420 chr3:75484846-75484858 chr3:75484264-75484276 chr3:75484357-75484369 chr3:75484897-75484909 chr3:75484266-75484275 chr3:75484827-75484836 chr3:75484825-75484837 chr3:75484408-75484419 chr3:75485147-75485158 chr3:75484847-75484856 chr3:75484359-75484368 chr3:75484354-75484368 chr3:75484846-75484858 chr3:75484734-75484743 chr3:75485147-75485159 chr3:75484410-75484419 chr3:75485207-75485216 chr3:75484357-75484368 chr3:75484994-75485003 chr3:75484358-75484368 chr3:75484396-75484408 chr3:75484408-75484420 chr3:75485205-75485216 chr3:75484398-75484407 chr3:75484732-75484744 chr3:75484729-75484743 chr3:75484396-75484407 chr3:75484359-75484368 chr3:75484825-75484837 chr3:75484265-75484274 chr3:75484993-75485002 chr3:75484848-75484857 chr3:75484993-75485003 chr3:75484732-75484744 chr3:75484264-75484276 chr3:75484397-75484406 chr3:75485147-75485159 chr3:75484358-75484368 chr3:75484743-75484755 chr3:75484894-75484908 chr3:75484265-75484275 chr3:75485175-75485184 chr3:75484358-75484367 chr3:75484743-75484755 chr3:75485037-75485046 chr3:75484265-75484275 chr3:75484992-75485004 chr3:75484843-75484857 chr3:75485205-75485217 chr3:75485206-75485215 chr3:75484322-75484334 chr3:75485202-75485216 chr3:75484745-75484754 chr3:75484733-75484742 chr3:75484992-75485004
9	ZEB1	chr3:75484974-75485343	GM12878	blood:	n/a	chr3:75485319-75485330
10	PAX5	chr3:75483014-75485756	GM12878	blood:	n/a	chr3:75485199-75485218 chr3:75484840-75484859
11	POLR2A	chr3:75481957-75485368	Hela-S3	cervix:	n/a	n/a
12	POLR2A	chr3:75484928-75485288	GM12878	blood:	n/a	n/a
13	MAX	chr3:75484933-75485602	K562	blood:	n/a	n/a
14	POLR2A	chr3:75483379-75485534	SK-N-MC	brain:	n/a	n/a
15	SP1	chr3:75484038-75485411	GM12878	blood:	n/a	chr3:75485205-75485217 chr3:75484994-75485003 chr3:75484744-75484753 chr3:75484357-75484369 chr3:75485149-75485158 chr3:75484408-75484420 chr3:75484846-75484858 chr3:75484264-75484276 chr3:75484357-75484369 chr3:75484897-75484909 chr3:75484266-75484275 chr3:75484827-75484836 chr3:75484825-75484837 chr3:75484408-75484419 chr3:75485147-75485158 chr3:75484847-75484856 chr3:75484359-75484368 chr3:75484354-75484368 chr3:75484846-75484858 chr3:75484734-75484743 chr3:75485147-75485159 chr3:75484410-75484419 chr3:75485207-75485216 chr3:75484357-75484368 chr3:75484994-75485003 chr3:75484358-75484368 chr3:75484396-75484408 chr3:75484408-75484420 chr3:75485205-75485216 chr3:75484398-75484407 chr3:75484732-75484744 chr3:75484729-75484743 chr3:75484396-75484407 chr3:75484359-75484368 chr3:75484825-75484837 chr3:75484265-75484274 chr3:75484993-75485002 chr3:75484848-75484857 chr3:75484993-75485003 chr3:75484732-75484744 chr3:75484264-75484276 chr3:75484397-75484406 chr3:75485147-75485159 chr3:75484358-75484368 chr3:75484743-75484755 chr3:75484894-75484908 chr3:75484265-75484275 chr3:75485175-75485184 chr3:75484358-75484367 chr3:75484743-75484755 chr3:75485037-75485046 chr3:75484265-75484275 chr3:75484992-75485004 chr3:75484843-75484857 chr3:75485205-75485217 chr3:75485206-75485215 chr3:75484322-75484334 chr3:75485202-75485216 chr3:75484745-75484754 chr3:75484733-75484742 chr3:75484992-75485004
16	TCF12	chr3:75484594-75485327	HepG2	liver:	n/a	chr3:75484871-75484881 chr3:75484870-75484877
17	POLR2A	chr3:75484844-75485484	HepG2	liver:	n/a	n/a
18	MXI1	chr3:75483179-75485820	SK-N-SH	brain:	n/a	n/a
19	POLR2A	chr3:75483485-75485329	GM12878	blood:	n/a	n/a
20	POLR2A	chr3:75483882-75485677	HepG2	liver:	n/a	n/a
21	TAF1	chr3:75483444-75485438	HepG2	liver:	n/a	n/a
22	TEAD4	chr3:75484809-75485314	H1-hESC	embryonic stem cell:	n/a	n/a
23	POLR2A	chr3:75483611-75485510	HepG2	liver:	n/a	n/a
24	POLR2A	chr3:75485166-75485579	H1-hESC	embryonic stem cell:	n/a	n/a
25	POLR2A	chr3:75483213-75485307	K562	blood:	n/a	n/a
26	POLR2A	chr3:75481807-75485392	U87	brain:	n/a	n/a
27	CEBPD	chr3:75485078-75485331	HepG2	liver:	n/a	n/a
28	MAZ	chr3:75483240-75485461	IMR90	lung:	n/a	chr3:75484265-75484275 chr3:75483517-75483526 chr3:75484262-75484271 chr3:75484356-75484366
29	HEY1	chr3:75483444-75486277	HepG2	liver:	n/a	chr3:75484739-75484754
30	POLR2A	chr3:75483446-75485435	A549	lung:	n/a	n/a
31	CTCF	chr3:75485217-75485344	Spleen_OC	spleen:	n/a	n/a
32	POLR2A	chr3:75484919-75485265	HCT-116	colon:	n/a	n/a
33	TAF1	chr3:75483424-75485790	H1-hESC	embryonic stem cell:	n/a	n/a
34	SP1	chr3:75484894-75485454	H1-hESC	embryonic stem cell:	n/a	chr3:75485205-75485217 chr3:75484994-75485003 chr3:75485149-75485158 chr3:75484897-75484909 chr3:75485147-75485158 chr3:75485147-75485159 chr3:75485207-75485216 chr3:75484994-75485003 chr3:75485205-75485216 chr3:75484993-75485002 chr3:75484993-75485003 chr3:75485147-75485159 chr3:75484894-75484908 chr3:75485175-75485184 chr3:75485037-75485046 chr3:75484992-75485004 chr3:75485205-75485217 chr3:75485206-75485215 chr3:75485202-75485216 chr3:75484992-75485004
35	UBTF	chr3:75484921-75485471	K562	blood:	n/a	n/a
36	POLR2A	chr3:75483236-75485617	HepG2	liver:	n/a	n/a
37	POLR2A	chr3:75484350-75485723	H1-hESC	embryonic stem cell:	n/a	n/a
38	POLR2A	chr3:75483388-75485453	Raji	blood:	n/a	n/a
39	TAF1	chr3:75483375-75485723	H1-hESC	embryonic stem cell:	n/a	n/a
40	MYC	chr3:75484055-75485404	A549	lung:	n/a	chr3:75484265-75484275 chr3:75484262-75484271 chr3:75484356-75484366 chr3:75484767-75484777
41	POLR2A	chr3:75481800-75485573	GM12892	blood:	n/a	n/a
42	POLR2A	chr3:75483909-75485268	GM18951	blood:	n/a	n/a
43	TAF1	chr3:75483502-75485380	HepG2	liver:	n/a	n/a
44	FOSL2	chr3:75483344-75485652	HepG2	liver:	n/a	chr3:75483515-75483527 chr3:75485205-75485214 chr3:75483517-75483525
45	POLR2A	chr3:75484848-75485306	A549	lung:	n/a	n/a
46	POLR2A	chr3:75485049-75485538	H1-hESC	embryonic stem cell:	n/a	n/a
47	CREB1	chr3:75484053-75485307	A549	lung:	n/a	n/a
48	SP4	chr3:75484664-75485279	H1-hESC	embryonic stem cell:	n/a	chr3:75485147-75485158 chr3:75485205-75485216 chr3:75484730-75484746 chr3:75485203-75485219
49	POLR2A	chr3:75483455-75485310	GM12878	blood:	n/a	n/a
50	TCF3	chr3:75484435-75485319	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:75484863..75485638-chr6:26156199..26156944,2	HCT-116	colon:

Variant related genes	Relation type
FAM86DP	TF binding region
ENSG00000168298	Chromatin interaction

Extended variants
information (count: 348 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10433534	1.00[EUR][1000 genomes]
rs10433535	1.00[EUR][1000 genomes]
rs10433536	1.00[EUR][1000 genomes]
rs12631335	1.00[EUR][1000 genomes]
rs12634106	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12635217	0.96[ASN][1000 genomes]
rs1848468	1.00[EUR][1000 genomes]
rs1848469	1.00[EUR][1000 genomes]
rs2324267	1.00[EUR][1000 genomes]
rs28520726	0.81[ASN][1000 genomes]
rs34073192	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34210102	0.84[ASN][1000 genomes]
rs3750285	0.93[ASN][1000 genomes]
rs3750286	0.93[ASN][1000 genomes]
rs3860611	1.00[EUR][1000 genomes]
rs4414879	1.00[EUR][1000 genomes]
rs4419402	1.00[EUR][1000 genomes]
rs4677522	0.93[ASN][1000 genomes]
rs57225284	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57239292	0.95[ASN][1000 genomes]
rs57630062	1.00[EUR][1000 genomes]
rs57907940	0.92[ASN][1000 genomes]
rs58692482	0.93[ASN][1000 genomes]
rs58955423	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60490155	0.95[ASN][1000 genomes]
rs60516359	0.89[ASN][1000 genomes]
rs60552743	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60555741	1.00[EUR][1000 genomes]
rs60622616	1.00[EUR][1000 genomes]
rs61157039	0.94[ASN][1000 genomes]
rs61683265	0.92[ASN][1000 genomes]
rs66613615	0.92[ASN][1000 genomes]
rs72628659	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72628660	0.89[ASN][1000 genomes]
rs72628662	0.95[ASN][1000 genomes]
rs72628663	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72628664	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72628665	0.95[ASN][1000 genomes]
rs72628666	0.93[ASN][1000 genomes]
rs72628667	0.93[ASN][1000 genomes]
rs72628668	0.90[ASN][1000 genomes]
rs72628670	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72628672	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72628684	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72628685	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72628687	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72628690	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72628691	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72628692	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72628693	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72628696	1.00[EUR][1000 genomes]
rs72628698	1.00[EUR][1000 genomes]
rs72628699	1.00[EUR][1000 genomes]
rs72628700	1.00[EUR][1000 genomes]
rs72628701	1.00[EUR][1000 genomes]
rs72628702	1.00[EUR][1000 genomes]
rs72630303	1.00[EUR][1000 genomes]
rs72630304	0.83[EUR][1000 genomes]
rs72630305	1.00[EUR][1000 genomes]
rs72630306	1.00[EUR][1000 genomes]
rs72630307	1.00[EUR][1000 genomes]
rs72630308	1.00[EUR][1000 genomes]
rs72630316	1.00[EUR][1000 genomes]
rs72630317	1.00[EUR][1000 genomes]
rs9798859	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:283 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916594	chr3:74943399-75540161	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
2	nsv997253	chr3:75168497-76021627	Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
3	nsv876962	chr3:75198904-75540544	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
4	nsv1002218	chr3:75221611-75702475	Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
5	esv2422240	chr3:75244279-75595933	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
6	nsv432427	chr3:75249409-75676582	Enhancers Strong transcription Bivalent Enhancer Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
7	esv2422315	chr3:75250088-75853296	Flanking Active TSS Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	44 gene(s)	inside rSNPs	diseases
8	nsv432428	chr3:75269488-75697169	Bivalent Enhancer Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
9	esv2757874	chr3:75346159-75617595	Active TSS Weak transcription Flanking Active TSS Genic enhancers Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
10	nsv428086	chr3:75346159-75914792	Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
11	nsv876966	chr3:75350891-75489636	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
12	nsv876967	chr3:75350891-75572199	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
13	nsv529016	chr3:75361506-75836858	Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
14	nsv432429	chr3:75363558-75639894	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
15	nsv432432	chr3:75377715-75639894	Enhancers Strong transcription Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
16	nsv432433	chr3:75377715-75774501	Bivalent/Poised TSS Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
17	nsv517173	chr3:75379085-75647887	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
18	esv20724	chr3:75381808-75700055	Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	30 gene(s)	inside rSNPs	diseases
19	nsv432434	chr3:75387457-75639894	Flanking Active TSS Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
20	nsv460705	chr3:75388161-75568219	Strong transcription Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
21	nsv590642	chr3:75388161-75568219	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
22	nsv432435	chr3:75391549-75639894	Active TSS ZNF genes & repeats Weak transcription Strong transcription Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
23	esv1830303	chr3:75391642-75616293	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
24	esv2754619	chr3:75392078-75564871	Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
25	esv2752016	chr3:75392078-75639894	Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
26	esv2756999	chr3:75392078-76003036	Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	41 gene(s)	inside rSNPs	diseases
27	esv2755877	chr3:75392373-75623338	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
28	esv2752919	chr3:75392373-75639894	Active TSS Strong transcription Weak transcription Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
29	nsv432436	chr3:75392373-75639894	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
30	nsv432441	chr3:75392373-75676582	Weak transcription Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
31	esv2755954	chr3:75392373-75697169	Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	30 gene(s)	inside rSNPs	diseases
32	nsv432446	chr3:75392373-75697169	Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	30 gene(s)	inside rSNPs	diseases
33	esv2754986	chr3:75392373-75735141	ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
34	esv2752017	chr3:75392373-75754704	Strong transcription Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
35	esv2752018	chr3:75393730-75776083	Enhancers Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
36	esv2756429	chr3:75394265-75595318	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
37	esv2755970	chr3:75394265-75639894	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
38	esv2755824	chr3:75394265-75734088	ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Genic enhancers Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
39	esv2756116	chr3:75394265-75735141	ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
40	nsv590643	chr3:75394787-75530895	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
41	nsv876969	chr3:75394787-75561341	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
42	nsv965176	chr3:75395167-75669055	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
43	esv2763755	chr3:75396818-75792056	ZNF genes & repeats Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
44	nsv1005724	chr3:75396818-75881261	ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	39 gene(s)	inside rSNPs	diseases
45	nsv999165	chr3:75404163-75532419	Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
46	nsv1010325	chr3:75406386-75516091	Bivalent Enhancer Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
47	nsv1013432	chr3:75406386-75549934	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
48	nsv1002268	chr3:75406386-75586793	Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
49	nsv1012365	chr3:75406386-75639894	Enhancers Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
50	nsv590644	chr3:75407145-75530895	Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:75482200-75485800	Active TSS	A549	lung
2	chr3:75483200-75485400	Active TSS	iPS-18 Cell Line	embryonic stem cell
3	chr3:75483200-75485400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr3:75483200-75485400	Active TSS	HMEC	breast
5	chr3:75483200-75485400	Active TSS	NHLF	lung
6	chr3:75483200-75485600	Active TSS	Brain Hippocampus Middle	brain
7	chr3:75483200-75485600	Active TSS	Hela-S3	cervix
8	chr3:75483200-75485800	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr3:75483200-75485800	Active TSS	H9 Cell Line	embryonic stem cell
10	chr3:75483200-75485800	Active TSS	HUES48 Cell Line	embryonic stem cell
11	chr3:75483200-75485800	Active TSS	HUES6 Cell Line	embryonic stem cell
12	chr3:75483200-75485800	Active TSS	iPS-15b Cell Line	embryonic stem cell
13	chr3:75483200-75485800	Active TSS	Breast Myoepithelial Primary Cells	Breast
14	chr3:75483200-75485800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr3:75483200-75485800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr3:75483200-75485800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr3:75483200-75485800	Active TSS	Rectal Mucosa Donor 29	rectum
18	chr3:75483200-75485800	Active TSS	GM12878-XiMat	blood
19	chr3:75483400-75485400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr3:75483400-75485400	Active TSS	Brain Cingulate Gyrus	brain
21	chr3:75483400-75485400	Active TSS	Fetal Intestine Small	intestine
22	chr3:75483400-75485400	Active TSS	Rectal Smooth Muscle	rectum
23	chr3:75483400-75485400	Active TSS	Right Ventricle	heart
24	chr3:75483400-75485400	Active TSS	K562	blood
25	chr3:75483400-75485400	Active TSS	NHDF-Ad	bronchial
26	chr3:75483400-75485400	Active TSS	NHEK	skin
27	chr3:75483400-75485400	Active TSS	Osteobl	bone
28	chr3:75483400-75485600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr3:75483400-75485600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr3:75483400-75485600	Active TSS	Primary T cells from cord blood	blood
31	chr3:75483400-75485600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr3:75483400-75485600	Active TSS	Colonic Mucosa	Colon
33	chr3:75483400-75485600	Active TSS	HepG2	liver
34	chr3:75483400-75485600	Active TSS	HSMMtube	muscle
35	chr3:75483400-75485800	Active TSS	H1 Cell Line	embryonic stem cell
36	chr3:75483400-75485800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr3:75483400-75485800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr3:75483400-75485800	Active TSS	HUES64 Cell Line	embryonic stem cell
39	chr3:75483400-75485800	Active TSS	iPS-20b Cell Line	embryonic stem cell
40	chr3:75483400-75485800	Active TSS	Fetal Brain Female	brain
41	chr3:75483400-75485800	Active TSS	Fetal Intestine Large	intestine
42	chr3:75483600-75485400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr3:75483600-75485400	Active TSS	Primary T helper naive cells from peripheral blood	blood
44	chr3:75483600-75485400	Active TSS	Brain Angular Gyrus	brain
45	chr3:75483600-75485400	Active TSS	Brain Substantia Nigra	brain
46	chr3:75483600-75485400	Active TSS	Duodenum Smooth Muscle	Duodenum
47	chr3:75483600-75485400	Active TSS	Esophagus	oesophagus
48	chr3:75483600-75485400	Active TSS	Fetal Lung	lung
49	chr3:75483600-75485400	Active TSS	Placenta Amnion	Placenta Amnion
50	chr3:75483600-75485400	Active TSS	Small Intestine	intestine

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