Variant report

Variant rs60478253
Chromosome Location chr1:217308453-217308454
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:217307200-217311600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
2 chr1:217307200-217314200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
3 chr1:217307200-217314200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
4 chr1:217307400-217308600 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr1:217307400-217308600 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:217307400-217310200 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:217307400-217311000 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:217307400-217314200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
9 chr1:217307600-217308600 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:217307600-217308600 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
11 chr1:217307600-217308800 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:217307600-217308800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:217307600-217309000 Bivalent Enhancer Placenta Placenta
14 chr1:217307600-217309200 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:217307600-217309200 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
16 chr1:217307600-217309200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
17 chr1:217307600-217309600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:217307600-217309600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
19 chr1:217307600-217309600 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
20 chr1:217307600-217310200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:217307600-217311200 Active TSS Right Ventricle heart
22 chr1:217307600-217311800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
23 chr1:217307800-217308600 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:217307800-217308600 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
25 chr1:217307800-217308600 Bivalent Enhancer Ovary ovary
26 chr1:217307800-217308800 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
27 chr1:217307800-217309000 Bivalent Enhancer Lung lung
28 chr1:217307800-217309200 Active TSS Aorta Aorta
29 chr1:217307800-217309200 Active TSS Gastric stomach
30 chr1:217307800-217309400 Active TSS Left Ventricle heart
31 chr1:217307800-217309600 Active TSS Brain Anterior Caudate brain
32 chr1:217307800-217309600 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
33 chr1:217307800-217309600 Bivalent/Poised TSS Colon Smooth Muscle Colon
34 chr1:217307800-217309800 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
35 chr1:217307800-217309800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
36 chr1:217307800-217309800 Active TSS Psoas Muscle Psoas
37 chr1:217307800-217310000 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
38 chr1:217307800-217310000 Bivalent/Poised TSS Rectal Smooth Muscle rectum
39 chr1:217307800-217310200 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:217307800-217310600 Active TSS Breast Myoepithelial Primary Cells Breast
41 chr1:217307800-217311000 Bivalent/Poised TSS Fetal Kidney kidney
42 chr1:217308000-217308600 Bivalent/Poised TSS Colonic Mucosa Colon
43 chr1:217308000-217308800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:217308000-217308800 Flanking Bivalent TSS/Enh NHEK skin
45 chr1:217308000-217309200 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:217308000-217309200 Bivalent/Poised TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:217308000-217309200 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
48 chr1:217308000-217309400 Bivalent/Poised TSS Brain Substantia Nigra brain
49 chr1:217308000-217309400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
50 chr1:217308000-217309400 Active TSS NHLF lung

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