Variant report

Variant	rs6048744
Chromosome Location	chr20:23328560-23328561
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:23321800-23329400	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr20:23325600-23329600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr20:23326000-23329000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr20:23326000-23329800	Weak transcription	Fetal Heart	heart
5	chr20:23326200-23329400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr20:23326200-23330000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr20:23327000-23330400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr20:23327000-23330800	Weak transcription	Spleen	Spleen
9	chr20:23327200-23330000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr20:23327400-23330000	Weak transcription	HSMM	muscle
11	chr20:23327600-23330000	Weak transcription	Pancreas	Pancrea
12	chr20:23327800-23328600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr20:23328000-23330000	Enhancers	Placenta Amnion	Placenta Amnion
14	chr20:23328200-23329400	Weak transcription	Fetal Muscle Leg	muscle
15	chr20:23328200-23330000	Weak transcription	Adipose Nuclei	Adipose
16	chr20:23328400-23329400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr20:23328400-23329400	Weak transcription	Fetal Muscle Trunk	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links