Variant report

Variant rs6048790
Chromosome Location chr20:23398551-23398552
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23354400-23399800 Weak transcription Hela-S3 cervix
2 chr20:23361200-23399600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr20:23372800-23400800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr20:23375600-23400000 Weak transcription Rectal Smooth Muscle rectum
5 chr20:23375800-23400000 Weak transcription H9 Cell Line embryonic stem cell
6 chr20:23375800-23400200 Weak transcription Fetal Brain Male brain
7 chr20:23376600-23400400 Weak transcription Fetal Muscle Trunk muscle
8 chr20:23378200-23400000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr20:23378400-23399800 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr20:23378800-23399800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr20:23379000-23400000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr20:23379000-23400200 Weak transcription Primary B cells from cord blood blood
13 chr20:23379000-23400400 Weak transcription Brain Substantia Nigra brain
14 chr20:23379200-23400000 Weak transcription HUVEC blood vessel
15 chr20:23379200-23400200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr20:23380800-23400000 Weak transcription NH-A brain
17 chr20:23382000-23400200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr20:23382200-23400200 Weak transcription A549 lung
19 chr20:23383000-23399800 Weak transcription Fetal Intestine Small intestine
20 chr20:23383000-23400400 Weak transcription Thymus Thymus
21 chr20:23383200-23400000 Weak transcription Primary monocytes fromperipheralblood blood
22 chr20:23383600-23400000 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr20:23383600-23400400 Weak transcription Fetal Thymus thymus
24 chr20:23383800-23398600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr20:23385200-23400400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr20:23385400-23399000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr20:23385400-23400400 Weak transcription Aorta Aorta
28 chr20:23387000-23400400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr20:23388800-23399800 Weak transcription Small Intestine intestine
30 chr20:23389200-23400400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr20:23389600-23400200 Weak transcription Primary B cells from peripheral blood blood
32 chr20:23390600-23398600 Weak transcription Colon Smooth Muscle Colon
33 chr20:23390800-23400400 Weak transcription Lung lung
34 chr20:23391200-23400400 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr20:23391200-23400400 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr20:23391200-23400800 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr20:23391400-23400400 Weak transcription Placenta Placenta
38 chr20:23392400-23400400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr20:23392800-23400400 Weak transcription Right Ventricle heart
40 chr20:23393000-23398800 Weak transcription Fetal Lung lung
41 chr20:23393000-23399600 Weak transcription Brain Anterior Caudate brain
42 chr20:23393000-23399800 Weak transcription HSMM muscle
43 chr20:23393000-23399800 Weak transcription NHLF lung
44 chr20:23393000-23400400 Weak transcription Stomach Smooth Muscle stomach
45 chr20:23393200-23399600 Weak transcription Osteobl bone
46 chr20:23393600-23399600 Weak transcription Liver Liver
47 chr20:23393800-23400000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr20:23393800-23400400 Weak transcription Right Atrium heart
49 chr20:23395000-23401000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr20:23395800-23399400 Enhancers Primary T helper naive cells from peripheral blood blood

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