Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFF	chr7:103078159-103078379	HepG2	liver:	n/a	n/a
2	MAZ	chr7:103078135-103078335	HepG2	liver:	n/a	n/a
3	MAFK	chr7:103078172-103078353	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:103078023-103078397	HepG2	liver:	n/a	n/a
5	JUND	chr7:103078166-103078275	HepG2	liver:	n/a	n/a
6	CEBPB	chr7:103078134-103078509	HepG2	liver:	n/a	n/a
7	HNF4A	chr7:103078086-103078389	HepG2	liver:	n/a	chr7:103078260-103078275
8	CEBPB	chr7:103078151-103078382	HepG2	liver:	n/a	n/a
9	FOXA1	chr7:103077902-103078410	HepG2	liver:	n/a	n/a
10	FOXA1	chr7:103078086-103078368	HepG2	liver:	n/a	n/a
11	FOXA1	chr7:103078048-103078398	HepG2	liver:	n/a	n/a
12	TEAD4	chr7:103077927-103078410	HepG2	liver:	n/a	n/a
13	SP1	chr7:103077955-103078423	HepG2	liver:	n/a	n/a
14	FOXA2	chr7:103078027-103078411	HepG2	liver:	n/a	n/a
15	FOXA1	chr7:103077882-103078527	HepG2	liver:	n/a	n/a
16	CEBPB	chr7:103078123-103078464	HepG2	liver:	n/a	n/a
17	MAFK	chr7:103078173-103078410	HepG2	liver:	n/a	n/a
18	HNF4G	chr7:103078038-103078401	HepG2	liver:	n/a	n/a
19	HNF4A	chr7:103078073-103078377	HepG2	liver:	n/a	chr7:103078260-103078275
20	RCOR1	chr7:103078166-103078237	HepG2	liver:	n/a	n/a

Variant related genes	Relation type
ENSG00000252047	TF binding region
ENSG00000251852	TF binding region

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12164066	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57002370	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58199198	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58447419	0.95[EUR][1000 genomes]
rs58909501	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59850329	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60091747	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61102415	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6970391	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73712348	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73712349	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73712381	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7779597	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030446	chr7:102932689-103221638	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103074000-103079800	Weak transcription	Stomach Mucosa	stomach
2	chr7:103077400-103079200	Enhancers	HepG2	liver

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