Variant report

Variant	rs60568195
Chromosome Location	chr6:132558596-132558597
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs58615402	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6913628	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6916210	0.85[AMR][1000 genomes]
rs9968837	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
2	nsv1024527	chr6:132532941-132571889	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132552200-132562400	Weak transcription	Psoas Muscle	Psoas
2	chr6:132556400-132558600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr6:132557000-132558800	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr6:132557200-132558600	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr6:132557200-132558800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr6:132557400-132558600	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr6:132557600-132559000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr6:132557800-132558800	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr6:132557800-132559000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr6:132558000-132558800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr6:132558200-132558800	Enhancers	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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