The 2.0 version of rSNPBase

Variant report

Variant rs60569310
Chromosome Location chr11:94316839-94316840
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94281000-94319200 Weak transcription Aorta Aorta
2 chr11:94282200-94317400 Weak transcription Stomach Smooth Muscle stomach
3 chr11:94282200-94322600 Weak transcription Brain Anterior Caudate brain
4 chr11:94282600-94322200 Weak transcription Fetal Stomach stomach
5 chr11:94284000-94323400 Weak transcription Fetal Muscle Leg muscle
6 chr11:94291800-94322000 Weak transcription Colon Smooth Muscle Colon
7 chr11:94293000-94322400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr11:94293600-94322400 Weak transcription Gastric stomach
9 chr11:94296600-94344800 Weak transcription Left Ventricle heart
10 chr11:94297200-94322200 Weak transcription Rectal Smooth Muscle rectum
11 chr11:94303000-94325400 Weak transcription Brain Cingulate Gyrus brain
12 chr11:94304400-94319600 Weak transcription Fetal Intestine Small intestine
13 chr11:94307600-94324000 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr11:94308000-94322200 Weak transcription Ovary ovary
15 chr11:94308000-94322400 Weak transcription Pancreas Pancrea
16 chr11:94308200-94342800 Weak transcription K562 blood
17 chr11:94308600-94317000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr11:94308600-94335400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr11:94309200-94322200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr11:94309200-94342600 Weak transcription Primary hematopoietic stem cells blood
21 chr11:94311600-94322400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr11:94312400-94320200 Weak transcription Brain Hippocampus Middle brain
23 chr11:94312800-94325200 Weak transcription Brain Inferior Temporal Lobe brain
24 chr11:94313800-94324000 Weak transcription Fetal Muscle Trunk muscle
25 chr11:94314600-94318400 Enhancers Primary monocytes fromperipheralblood blood
26 chr11:94315200-94317400 Weak transcription Adipose Nuclei Adipose
27 chr11:94315200-94317800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
28 chr11:94315200-94326000 Weak transcription Brain Angular Gyrus brain
29 chr11:94315400-94317200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr11:94315600-94317200 Weak transcription Placenta Amnion Placenta Amnion
31 chr11:94315800-94317400 Weak transcription Primary B cells from cord blood blood
32 chr11:94315800-94320600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr11:94316200-94317800 Flanking Active TSS GM12878-XiMat blood
34 chr11:94316200-94328400 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr11:94316600-94317400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr11:94316600-94317600 Enhancers HMEC breast
37 chr11:94316600-94317600 Enhancers HUVEC blood vessel
38 chr11:94316600-94317800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr11:94316600-94318000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr11:94316600-94318000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
41 chr11:94316800-94317000 Genic enhancers Duodenum Mucosa Duodenum
42 chr11:94316800-94317400 Enhancers Duodenum Smooth Muscle Duodenum
43 chr11:94316800-94317400 Strong transcription Fetal Intestine Large intestine
44 chr11:94316800-94317600 Strong transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015