Variant report

Variant	rs60775162
Chromosome Location	chr16:75745137-75745138
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:75739275..75740832-chr16:75744437..75746332,2	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs1030264	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10871314	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs11643215	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12443899	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12596083	0.83[ASN][1000 genomes]
rs12597472	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17764918	0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs1865493	0.86[EUR][1000 genomes]
rs2042406	0.82[ASN][1000 genomes]
rs2059261	0.80[ASN][1000 genomes]
rs2903096	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs35977374	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4633754	0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs4887835	0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4887836	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4887837	0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs4888448	0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4888449	0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4888451	0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs4888452	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4888455	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs56954102	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs57208266	0.82[AMR][1000 genomes]
rs58091977	0.87[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs58264015	0.82[ASN][1000 genomes]
rs58533792	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs58846463	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs59449831	0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs60895247	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61183686	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7187419	0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs8048533	0.83[AMR][1000 genomes]
rs8048806	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8053219	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs9921364	0.80[ASN][1000 genomes]
rs9930993	0.81[ASN][1000 genomes]
rs9931730	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931939	chr16:75261354-75765025	Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
2	nsv532562	chr16:75614947-76371158	Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
3	nsv1062010	chr16:75628562-75825725	Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
4	nsv1064880	chr16:75628562-75895699	Enhancers Genic enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
5	nsv542960	chr16:75628562-75895699	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
6	nsv1065543	chr16:75631306-75800170	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
7	esv3390407	chr16:75701870-75751074	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
8	nsv906930	chr16:75728261-75872464	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:75744800-75753000	Weak transcription	Aorta	Aorta

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