Variant report
| Variant | rs60820628 |
|---|---|
| Chromosome Location | chr2:30864846-30864847 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:30835800-30871200 | Weak transcription | Small Intestine | intestine |
| 2 | chr2:30841800-30872200 | Weak transcription | Spleen | Spleen |
| 3 | chr2:30845600-30877800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 4 | chr2:30845800-30877800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 5 | chr2:30850200-30874600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 6 | chr2:30850400-30865000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 7 | chr2:30850400-30869200 | Weak transcription | Gastric | stomach |
| 8 | chr2:30850400-30874600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 9 | chr2:30851400-30865000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 10 | chr2:30851800-30865000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 11 | chr2:30853200-30867200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 12 | chr2:30853200-30872000 | Weak transcription | NHDF-Ad | bronchial |
| 13 | chr2:30854000-30867000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 14 | chr2:30854200-30867600 | Weak transcription | Psoas Muscle | Psoas |
| 15 | chr2:30854400-30865000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 16 | chr2:30854400-30865200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 17 | chr2:30854400-30866600 | Weak transcription | GM12878-XiMat | blood |
| 18 | chr2:30855000-30865000 | Weak transcription | Fetal Intestine Small | intestine |
| 19 | chr2:30855000-30865400 | Weak transcription | HSMM | muscle |
| 20 | chr2:30855600-30867200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr2:30856400-30866600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 22 | chr2:30857000-30869000 | Weak transcription | Hela-S3 | cervix |
| 23 | chr2:30858600-30865400 | Strong transcription | Primary T cells from cord blood | blood |
| 24 | chr2:30859600-30872000 | Weak transcription | Fetal Stomach | stomach |
| 25 | chr2:30860200-30865000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 26 | chr2:30860200-30866200 | Weak transcription | HUVEC | blood vessel |
| 27 | chr2:30860400-30878200 | Weak transcription | NHLF | lung |
| 28 | chr2:30861400-30876800 | Weak transcription | Fetal Heart | heart |
| 29 | chr2:30861600-30865200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 30 | chr2:30861600-30872200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 31 | chr2:30862000-30868600 | Weak transcription | Brain Substantia Nigra | brain |
| 32 | chr2:30862200-30865200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 33 | chr2:30862400-30866800 | Weak transcription | HMEC | breast |
| 34 | chr2:30862400-30868400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 35 | chr2:30862600-30865000 | Weak transcription | Fetal Kidney | kidney |
| 36 | chr2:30862600-30865200 | Strong transcription | Primary hematopoietic stem cells | blood |
| 37 | chr2:30862800-30865200 | Strong transcription | Dnd41 | blood |
| 38 | chr2:30862800-30865600 | Strong transcription | Fetal Lung | lung |
| 39 | chr2:30863000-30865200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 40 | chr2:30863000-30865200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 41 | chr2:30863000-30865200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 42 | chr2:30863000-30865200 | Strong transcription | A549 | lung |
| 43 | chr2:30863000-30865400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 44 | chr2:30863000-30866000 | Weak transcription | Adipose Nuclei | Adipose |
| 45 | chr2:30863200-30865000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 46 | chr2:30863200-30865000 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 47 | chr2:30863200-30871800 | Weak transcription | Colon Smooth Muscle | Colon |
| 48 | chr2:30863400-30865600 | Weak transcription | Esophagus | oesophagus |
| 49 | chr2:30863400-30866800 | Weak transcription | Pancreas | Pancrea |
| 50 | chr2:30863600-30866600 | Weak transcription | Fetal Intestine Large | intestine |
