The 2.0 version of rSNPBase

Variant report

Variant rs72858912
Chromosome Location chr2:30769086-30769087
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30749000-30812600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:30753600-30770000 Weak transcription Small Intestine intestine
3 chr2:30757800-30809000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr2:30758200-30795000 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr2:30758600-30853800 Weak transcription Thymus Thymus
6 chr2:30758800-30784400 Weak transcription Primary T cells fromperipheralblood blood
7 chr2:30758800-30785000 Weak transcription Left Ventricle heart
8 chr2:30758800-30809600 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:30759000-30785200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr2:30759200-30805600 Weak transcription K562 blood
11 chr2:30759400-30769600 Weak transcription HepG2 liver
12 chr2:30759400-30785000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:30759400-30785000 Weak transcription Duodenum Mucosa Duodenum
14 chr2:30759400-30785000 Weak transcription Dnd41 blood
15 chr2:30759600-30771200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr2:30759600-30786000 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr2:30763800-30771800 Weak transcription Fetal Intestine Small intestine
18 chr2:30764000-30792400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:30764400-30784200 Weak transcription Primary B cells from cord blood blood
20 chr2:30764800-30769200 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr2:30765000-30773200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr2:30765000-30793600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr2:30765400-30769200 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr2:30765400-30770800 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr2:30765600-30773800 Weak transcription Primary T cells from cord blood blood
26 chr2:30766800-30810200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:30767000-30771400 Enhancers Fetal Heart heart
28 chr2:30767400-30770000 Enhancers Fetal Lung lung
29 chr2:30767600-30770000 Enhancers Pancreatic Islets Pancreatic Islet
30 chr2:30767600-30771000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr2:30767600-30771400 Weak transcription Fetal Intestine Large intestine
32 chr2:30767800-30769200 Enhancers Colon Smooth Muscle Colon
33 chr2:30768000-30769200 Enhancers Rectal Smooth Muscle rectum
34 chr2:30768000-30769600 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr2:30768000-30770400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr2:30768200-30773800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:30768800-30770000 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015