Variant report

Variant	rs60883745
Chromosome Location	chr12:10220458-10220459
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10505747	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11831360	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11835234	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs5011267	0.87[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs58945086	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59462804	0.98[ASN][1000 genomes]
rs60021747	0.89[EUR][1000 genomes]
rs61459404	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73259758	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73259794	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10218000-10222000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr12:10218200-10220600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr12:10218200-10221000	Weak transcription	Adipose Nuclei	Adipose
4	chr12:10219000-10222600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr12:10219000-10236800	Weak transcription	Left Ventricle	heart
6	chr12:10219200-10221600	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr12:10219600-10221000	Enhancers	Primary B cells from cord blood	blood
8	chr12:10219600-10221600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr12:10220000-10220600	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr12:10220000-10220600	Flanking Active TSS	HUVEC	blood vessel
11	chr12:10220000-10221200	Enhancers	Rectal Smooth Muscle	rectum
12	chr12:10220000-10221600	Enhancers	Brain Substantia Nigra	brain
13	chr12:10220000-10223000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
14	chr12:10220200-10220600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr12:10220200-10220800	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr12:10220200-10221200	Weak transcription	Colon Smooth Muscle	Colon
17	chr12:10220200-10222000	Flanking Active TSS	Primary hematopoietic stem cells	blood
18	chr12:10220200-10222000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr12:10220400-10221000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr12:10220400-10222200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood

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