The 2.0 version of rSNPBase

Variant report

Variant rs60892952
Chromosome Location chr11:36434960-36434961
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:36400200-36475400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr11:36400800-36443600 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr11:36403000-36438200 Weak transcription Ovary ovary
4 chr11:36407200-36441800 Weak transcription Muscle Satellite Cultured Cells --
5 chr11:36413000-36471000 Weak transcription Aorta Aorta
6 chr11:36413200-36441600 Weak transcription HSMMtube muscle
7 chr11:36414800-36475600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr11:36418200-36436800 Weak transcription Pancreas Pancrea
9 chr11:36420400-36453200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr11:36420600-36435200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr11:36420600-36435200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr11:36421400-36435000 Strong transcription Cortex derived primary cultured neurospheres brain
13 chr11:36423400-36441800 Weak transcription HMEC breast
14 chr11:36425800-36439000 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr11:36425800-36441400 Weak transcription Fetal Kidney kidney
16 chr11:36426200-36435200 Strong transcription Fetal Intestine Small intestine
17 chr11:36426400-36435200 Strong transcription Fetal Intestine Large intestine
18 chr11:36428000-36435000 Enhancers Primary monocytes fromperipheralblood blood
19 chr11:36428200-36435000 Enhancers Primary hematopoietic stem cells blood
20 chr11:36428800-36435000 Enhancers Fetal Thymus thymus
21 chr11:36429600-36436600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr11:36430400-36435000 Enhancers Brain Substantia Nigra brain
23 chr11:36431200-36435200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr11:36431200-36453200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr11:36431400-36435000 Genic enhancers Primary T cells fromperipheralblood blood
26 chr11:36431400-36435000 Genic enhancers Duodenum Mucosa Duodenum
27 chr11:36432000-36467800 Weak transcription Esophagus oesophagus
28 chr11:36432200-36442000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr11:36432400-36435000 Enhancers Brain Cingulate Gyrus brain
30 chr11:36432600-36435000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr11:36432600-36435200 Enhancers NH-A brain
32 chr11:36432600-36436000 Weak transcription Stomach Smooth Muscle stomach
33 chr11:36432600-36452200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr11:36432800-36435000 Enhancers Brain Hippocampus Middle brain
35 chr11:36432800-36440600 Weak transcription Fetal Muscle Trunk muscle
36 chr11:36432800-36440600 Weak transcription NHEK skin
37 chr11:36433000-36435000 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr11:36433200-36435000 Enhancers Primary B cells from peripheral blood blood
39 chr11:36433200-36435600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr11:36433200-36448600 Weak transcription Rectal Smooth Muscle rectum
41 chr11:36433400-36435200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr11:36433400-36439600 Weak transcription Liver Liver
43 chr11:36433400-36442600 Weak transcription Small Intestine intestine
44 chr11:36433400-36452600 Weak transcription Left Ventricle heart
45 chr11:36433600-36435000 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr11:36433600-36435200 Strong transcription Rectal Mucosa Donor 31 rectum
47 chr11:36433600-36438000 Weak transcription Spleen Spleen
48 chr11:36433600-36439800 Weak transcription Fetal Muscle Leg muscle
49 chr11:36433600-36442800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr11:36433800-36435000 Enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015