The 2.0 version of rSNPBase

Variant report

Variant rs71481977
Chromosome Location chr11:36435110-36435111
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:36400200-36475400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr11:36400800-36443600 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr11:36403000-36438200 Weak transcription Ovary ovary
4 chr11:36407200-36441800 Weak transcription Muscle Satellite Cultured Cells --
5 chr11:36413000-36471000 Weak transcription Aorta Aorta
6 chr11:36413200-36441600 Weak transcription HSMMtube muscle
7 chr11:36414800-36475600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr11:36418200-36436800 Weak transcription Pancreas Pancrea
9 chr11:36420400-36453200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr11:36420600-36435200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr11:36420600-36435200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr11:36423400-36441800 Weak transcription HMEC breast
13 chr11:36425800-36439000 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr11:36425800-36441400 Weak transcription Fetal Kidney kidney
15 chr11:36426200-36435200 Strong transcription Fetal Intestine Small intestine
16 chr11:36426400-36435200 Strong transcription Fetal Intestine Large intestine
17 chr11:36429600-36436600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr11:36431200-36435200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr11:36431200-36453200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr11:36432000-36467800 Weak transcription Esophagus oesophagus
21 chr11:36432200-36442000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr11:36432600-36435200 Enhancers NH-A brain
23 chr11:36432600-36436000 Weak transcription Stomach Smooth Muscle stomach
24 chr11:36432600-36452200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr11:36432800-36440600 Weak transcription Fetal Muscle Trunk muscle
26 chr11:36432800-36440600 Weak transcription NHEK skin
27 chr11:36433200-36435600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr11:36433200-36448600 Weak transcription Rectal Smooth Muscle rectum
29 chr11:36433400-36435200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr11:36433400-36439600 Weak transcription Liver Liver
31 chr11:36433400-36442600 Weak transcription Small Intestine intestine
32 chr11:36433400-36452600 Weak transcription Left Ventricle heart
33 chr11:36433600-36435200 Strong transcription Rectal Mucosa Donor 31 rectum
34 chr11:36433600-36438000 Weak transcription Spleen Spleen
35 chr11:36433600-36439800 Weak transcription Fetal Muscle Leg muscle
36 chr11:36433600-36442800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr11:36433800-36471400 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr11:36434000-36435200 Genic enhancers Primary hematopoietic stem cells short term culture blood
39 chr11:36434000-36435200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:36434000-36437400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr11:36434200-36435200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr11:36434200-36435200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr11:36434200-36435200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr11:36434200-36441800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr11:36434400-36435200 Strong transcription HSMM muscle
46 chr11:36434400-36435400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr11:36434400-36437200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr11:36434400-36437600 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr11:36434400-36438400 Weak transcription Placenta Amnion Placenta Amnion
50 chr11:36434600-36439000 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015