The 2.0 version of rSNPBase

Variant report

Variant rs60911244
Chromosome Location chr1:98409164-98409165
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:98407000-98410200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
2 chr1:98407200-98409600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr1:98407400-98409400 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr1:98407400-98409400 Enhancers Primary T helper cells fromperipheralblood blood
5 chr1:98407400-98409400 Enhancers Primary T regulatory cells fromperipheralblood blood
6 chr1:98407400-98409400 Enhancers Primary T killer memory cells from peripheral blood blood
7 chr1:98407400-98410800 Enhancers HUVEC blood vessel
8 chr1:98407600-98409200 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr1:98407800-98409400 Enhancers Primary hematopoietic stem cells short term culture blood
10 chr1:98407800-98409400 Enhancers Brain Cingulate Gyrus brain
11 chr1:98407800-98409400 Enhancers NHEK skin
12 chr1:98407800-98409800 Enhancers Primary T cells fromperipheralblood blood
13 chr1:98408000-98409400 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr1:98408200-98409400 Enhancers HSMM muscle
15 chr1:98408200-98409600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:98408400-98409200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:98408400-98409400 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr1:98408400-98409600 Enhancers Primary T cells from cord blood blood
19 chr1:98408400-98409600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:98408600-98409400 Enhancers Primary T helper cells PMA-I stimulated --
21 chr1:98408600-98410400 Enhancers Dnd41 blood
22 chr1:98408800-98409200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:98408800-98409200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:98408800-98409200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:98408800-98409200 Flanking Active TSS HMEC breast
26 chr1:98408800-98409400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:98408800-98409400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:98408800-98409400 Active TSS Brain Hippocampus Middle brain
29 chr1:98408800-98409600 Enhancers Primary hematopoietic stem cells blood
30 chr1:98409000-98409200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:98409000-98409200 Flanking Active TSS Brain Substantia Nigra brain
32 chr1:98409000-98409400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:98409000-98409400 Flanking Active TSS Muscle Satellite Cultured Cells --
34 chr1:98409000-98409400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:98409000-98409400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:98409000-98409400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:98409000-98409400 Active TSS Brain Inferior Temporal Lobe brain
38 chr1:98409000-98409400 Flanking Active TSS NH-A brain
39 chr1:98409000-98409400 Enhancers NHLF lung
40 chr1:98409000-98409600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:98409000-98409600 Flanking Active TSS NHDF-Ad bronchial
42 chr1:98409000-98409600 Flanking Active TSS Osteobl bone
43 chr1:98409000-98410400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015