The 2.0 version of rSNPBase

Variant report

Variant rs72979788
Chromosome Location chr1:98348409-98348410
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:98303200-98351000 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:98309400-98367200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:98311800-98350400 Weak transcription Stomach Smooth Muscle stomach
4 chr1:98316400-98349200 Weak transcription NHDF-Ad bronchial
5 chr1:98320800-98351800 Weak transcription Esophagus oesophagus
6 chr1:98321000-98351800 Weak transcription Left Ventricle heart
7 chr1:98323400-98351800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr1:98330400-98351600 Weak transcription Brain Substantia Nigra brain
9 chr1:98330800-98351800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:98331600-98348600 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr1:98333200-98351600 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr1:98333200-98353400 Weak transcription Fetal Lung lung
13 chr1:98333400-98351600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:98335400-98349000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:98336200-98350600 Weak transcription Brain Cingulate Gyrus brain
16 chr1:98336200-98352600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:98336400-98349800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:98337600-98354200 Weak transcription Fetal Thymus thymus
19 chr1:98337800-98351800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:98339600-98351800 Weak transcription Spleen Spleen
21 chr1:98339800-98351800 Weak transcription Small Intestine intestine
22 chr1:98340200-98349800 Weak transcription Fetal Intestine Large intestine
23 chr1:98341000-98351400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:98341000-98351800 Weak transcription Brain Anterior Caudate brain
25 chr1:98341200-98351600 Weak transcription Aorta Aorta
26 chr1:98341400-98349800 Weak transcription Brain Hippocampus Middle brain
27 chr1:98341600-98349000 Strong transcription Primary monocytes fromperipheralblood blood
28 chr1:98341800-98349000 Strong transcription Dnd41 blood
29 chr1:98342400-98351600 Weak transcription NH-A brain
30 chr1:98342800-98348600 Weak transcription Brain Angular Gyrus brain
31 chr1:98342800-98351600 Weak transcription Ovary ovary
32 chr1:98343000-98351800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:98343800-98348600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr1:98344000-98351800 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr1:98344200-98348600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:98344200-98349600 Weak transcription Duodenum Mucosa Duodenum
37 chr1:98345000-98350400 Weak transcription Adipose Nuclei Adipose
38 chr1:98345400-98358800 Weak transcription HUVEC blood vessel
39 chr1:98345800-98348600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:98345800-98348600 Strong transcription Liver Liver
41 chr1:98345800-98349000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:98346400-98348600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:98346400-98348600 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr1:98346400-98354400 Weak transcription Hela-S3 cervix
45 chr1:98346600-98348600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr1:98347000-98351400 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr1:98347000-98352400 Weak transcription Osteobl bone
48 chr1:98347000-98359000 Weak transcription Muscle Satellite Cultured Cells --
49 chr1:98347200-98352200 Weak transcription Primary T cells from cord blood blood
50 chr1:98347200-98353200 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015