Variant report
| Variant | rs60915799 |
|---|---|
| Chromosome Location | chr19:38835903-38835904 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:38828000-38838400 | Weak transcription | HSMMtube | muscle |
| 2 | chr19:38828200-38836400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 3 | chr19:38828200-38836600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr19:38828200-38836800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 5 | chr19:38828200-38837000 | Weak transcription | Colon Smooth Muscle | Colon |
| 6 | chr19:38828200-38837400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 7 | chr19:38828200-38838000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 8 | chr19:38828200-38838200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr19:38828200-38838400 | Weak transcription | Colonic Mucosa | Colon |
| 10 | chr19:38828200-38838400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 11 | chr19:38828200-38839000 | Weak transcription | Brain Anterior Caudate | brain |
| 12 | chr19:38828200-38840400 | Weak transcription | Left Ventricle | heart |
| 13 | chr19:38828200-38841400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr19:38828200-38842000 | Weak transcription | Brain Angular Gyrus | brain |
| 15 | chr19:38828200-38842600 | Weak transcription | Esophagus | oesophagus |
| 16 | chr19:38828200-38844800 | Weak transcription | Brain Substantia Nigra | brain |
| 17 | chr19:38828200-38852000 | Weak transcription | Right Atrium | heart |
| 18 | chr19:38828400-38836200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 19 | chr19:38828400-38836800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 20 | chr19:38828400-38837200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 21 | chr19:38828400-38837800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 22 | chr19:38828400-38838200 | Weak transcription | Adipose Nuclei | Adipose |
| 23 | chr19:38828400-38839200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr19:38828400-38839600 | Weak transcription | Primary T cells from cord blood | blood |
| 25 | chr19:38828400-38839800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 26 | chr19:38828400-38839800 | Weak transcription | Right Ventricle | heart |
| 27 | chr19:38828400-38840000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 28 | chr19:38828600-38838800 | Weak transcription | Primary B cells from cord blood | blood |
| 29 | chr19:38828600-38839000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 30 | chr19:38828600-38839600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 31 | chr19:38828800-38837000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 32 | chr19:38829000-38838600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 33 | chr19:38829400-38836600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 34 | chr19:38829400-38839800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 35 | chr19:38829600-38839400 | Weak transcription | Thymus | Thymus |
| 36 | chr19:38830200-38844800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 37 | chr19:38830400-38837800 | Weak transcription | Fetal Intestine Large | intestine |
| 38 | chr19:38831600-38838200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 39 | chr19:38832200-38836600 | Strong transcription | Fetal Stomach | stomach |
| 40 | chr19:38832200-38838200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 41 | chr19:38832200-38840400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 42 | chr19:38833200-38837800 | Strong transcription | Fetal Intestine Small | intestine |
| 43 | chr19:38833200-38838200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 44 | chr19:38833400-38836800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 45 | chr19:38833800-38837800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 46 | chr19:38833800-38838000 | Weak transcription | NHEK | skin |
| 47 | chr19:38833800-38840400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr19:38834200-38836600 | Weak transcription | Aorta | Aorta |
| 49 | chr19:38834200-38845000 | Weak transcription | Spleen | Spleen |
| 50 | chr19:38835000-38836400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
