Variant report

Variant	rs60959435
Chromosome Location	chr4:10020896-10020897
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:180)
CpG islands
(count:61)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:180 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTBP2	chr4:10020415-10021150	H1-hESC	embryonic stem cell:	n/a	n/a
2	CBX3	chr4:10020317-10021175	K562	blood:	n/a	n/a
3	SIN3A	chr4:10020352-10021137	H1-hESC	embryonic stem cell:	n/a	chr4:10020569-10020580
4	MAX	chr4:10020364-10020906	MCF-7	breast:	n/a	n/a
5	TBL1XR1	chr4:10020425-10020913	K562	blood:	n/a	n/a
6	POLR2A	chr4:10020549-10021008	SK-N-MC	brain:	n/a	n/a
7	RAD21	chr4:10020133-10021130	HCT-116	colon:	n/a	chr4:10020565-10020577 chr4:10020340-10020352 chr4:10020976-10020989 chr4:10020505-10020524 chr4:10020563-10020582
8	POLR2A	chr4:10020474-10021385	MCF10A-Er-Src	breast:	n/a	n/a
9	MAX	chr4:10020317-10021258	HCT-116	colon:	n/a	n/a
10	POLR2A	chr4:10020415-10020977	IMR90	lung:	n/a	n/a
11	MTA3	chr4:10020321-10021539	GM12878	blood:	n/a	n/a
12	PAX5	chr4:10020355-10021099	GM12878	blood:	n/a	n/a
13	POLR2A	chr4:10020620-10021150	HCT-116	colon:	n/a	n/a
14	MAX	chr4:10020382-10021056	GM12878	blood:	n/a	n/a
15	RAD21	chr4:10020328-10021058	IMR90	lung:	n/a	chr4:10020565-10020577 chr4:10020340-10020352 chr4:10020976-10020989 chr4:10020505-10020524 chr4:10020563-10020582
16	POLR2A	chr4:10020470-10021049	GM12878	blood:	n/a	n/a
17	RAD21	chr4:10020188-10021204	HCT-116	colon:	n/a	chr4:10020565-10020577 chr4:10020340-10020352 chr4:10020976-10020989 chr4:10020505-10020524 chr4:10020563-10020582
18	MAX	chr4:10020338-10021159	H1-hESC	embryonic stem cell:	n/a	n/a
19	POLR2A	chr4:10020728-10020923	MCF-7	breast:	n/a	n/a
20	ATF2	chr4:10020411-10021134	GM12878	blood:	n/a	n/a
21	NFIC	chr4:10020452-10021209	ECC-1	luminal epithelium:	n/a	n/a
22	MAX	chr4:10020471-10021120	H1-hESC	embryonic stem cell:	n/a	n/a
23	CTCF	chr4:10020889-10020931	GM13976	blood:	n/a	n/a
24	MTA3	chr4:10020545-10021283	GM12878	blood:	n/a	n/a
25	E2F4	chr4:10020143-10021140	MCF10A-Er-Src	breast:	n/a	chr4:10020582-10020593
26	E2F6	chr4:10020436-10021042	K562	blood:	n/a	chr4:10020582-10020593
27	POLR2A	chr4:10020512-10021011	GM12878	blood:	n/a	n/a
28	POLR2A	chr4:10020610-10020931	K562	blood:	n/a	n/a
29	HEY1	chr4:10020578-10020898	K562	blood:	n/a	n/a
30	TEAD4	chr4:10020372-10021064	K562	blood:	n/a	n/a
31	E2F6	chr4:10020395-10021306	K562	blood:	n/a	chr4:10020582-10020593
32	MYC	chr4:10020365-10021203	K562	blood:	n/a	n/a
33	POLR2A	chr4:10020845-10021950	HepG2	liver:	n/a	n/a
34	USF1	chr4:10020357-10020916	K562	blood:	n/a	chr4:10020562-10020578
35	POLR2A	chr4:10020571-10021060	GM12892	blood:	n/a	n/a
36	POLR2A	chr4:10020484-10021007	PANC-1	pancreas:	n/a	n/a
37	STAT3	chr4:10020626-10021056	MCF10A-Er-Src	breast:	n/a	n/a
38	POLR2A	chr4:10020404-10021393	GM18505	blood:	n/a	n/a
39	POLR2A	chr4:10020462-10021651	GM19193	blood:	n/a	n/a
40	POLR2A	chr4:10020476-10021056	H1-hESC	embryonic stem cell:	n/a	n/a
41	NRF1	chr4:10020457-10021019	GM12878	blood:	n/a	chr4:10020880-10020891
42	POLR2A	chr4:10020473-10021440	GM12878	blood:	n/a	n/a
43	YY1	chr4:10020308-10021050	K562	blood:	n/a	chr4:10020563-10020577
44	POLR2A	chr4:10020835-10021893	HepG2	liver:	n/a	n/a
45	CREB1	chr4:10020314-10021062	H1-hESC	embryonic stem cell:	n/a	n/a
46	POLR2A	chr4:10020550-10021023	GM12891	blood:	n/a	n/a
47	FOXM1	chr4:10020225-10020940	GM12878	blood:	n/a	n/a
48	POLR2A	chr4:10020539-10020998	A549	lung:	n/a	n/a
49	JUND	chr4:10020359-10021074	K562	blood:	n/a	n/a
50	MAX	chr4:10020216-10021345	HCT-116	colon:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:10020882-10020932	SK-N-SH_RA	brain:	n/a
2	chr4:10020882-10020932	NB4	blood:	n/a
3	chr4:10020882-10020932	MCF10A-Er-Src	breast:	n/a
4	chr4:10020882-10020932	HCPEpiC	choroid plexus:	n/a
5	chr4:10020882-10020932	HCM	heart:	n/a
6	chr4:10020882-10020932	HCF	heart:	n/a
7	chr4:10020882-10020932	PFSK-1	brain:	n/a
8	chr4:10020882-10020932	GM12891	blood:	n/a
9	chr4:10020882-10020932	SK-N-SH	brain:	n/a
10	chr4:10020882-10020932	HPAEpiC	pulmonary alveolar:	n/a
11	chr4:10020882-10020932	HEK293	kidney:	embryo
12	chr4:10020882-10020932	MCF-7	breast:	n/a
13	chr4:10020882-10020932	AG04450	lung:	fetal
14	chr4:10020882-10020932	AG09309	skin:	n/a
15	chr4:10020882-10020932	HCT-116	colon:	n/a
16	chr4:10020882-10020932	SAEC	small airway:	n/a
17	chr4:10020882-10020932	AG04449	skin:	fetal
18	chr4:10020882-10020932	NT2-D1	testis:	n/a
19	chr4:10020882-10020932	ovcar-3	ovarian:	n/a
20	chr4:10020882-10020932	HRCEpiC	kidney:	n/a
21	chr4:10020882-10020932	Caco-2	colon:	n/a
22	chr4:10020882-10020932	NHDF-neo	bronchial:	n/a
23	chr4:10020882-10020932	HEEpiC	esophagus:	n/a
24	chr4:10020882-10020932	HIPEpiC	eye:	n/a
25	chr4:10020882-10020932	LNCaP	prostate:	n/a
26	chr4:10020882-10020932	GM12892	blood:	n/a
27	chr4:10020882-10020932	HMEC	breast:	n/a
28	chr4:10020882-10020932	U87	brain:	n/a
29	chr4:10020882-10020932	RPTEC	kidney:	n/a
30	chr4:10020882-10020932	BJ	skin:	n/a
31	chr4:10020882-10020932	Hela-S3	cervix:	n/a
32	chr4:10020882-10020932	SK-N-MC	brain:	n/a
33	chr4:10020882-10020932	AoSMC	blood vessel:	n/a
34	chr4:10020882-10020932	NHBE	bronchial:	n/a
35	chr4:10020882-10020932	IMR90	lung:	fetal
36	chr4:10020882-10020932	T-47D	breast:	n/a
37	chr4:10020882-10020932	ProgFib	skin:	n/a
38	chr4:10020882-10020932	BE2_C	brain:	n/a
39	chr4:10020882-10020932	ECC-1	luminal epithelium:	n/a
40	chr4:10020882-10020932	GM19239	blood:	n/a
41	chr4:10020882-10020932	HRPEpiC	eye:	n/a
42	chr4:10020882-10020932	Hepatocyte	liver:	n/a
43	chr4:10020882-10020932	HepG2	liver:	n/a
44	chr4:10020882-10020932	GM12878	blood:	n/a
45	chr4:10020882-10020932	K562	blood:	n/a
46	chr4:10020882-10020932	NH-A	brain:	n/a
47	chr4:10020882-10020932	A549	lung:	n/a
48	chr4:10020882-10020932	PANC-1	pancreas:	n/a
49	chr4:10020882-10020932	SKMC	muscle:	n/a
50	chr4:10020882-10020932	HAEpiC	amniotic membrane:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:10019361..10022054-chr4:10108000..10110178,2	K562	blood:
2	chr4:10020622..10022306-chr4:10022841..10025006,2	MCF-7	breast:
3	chr4:10019661..10022849-chr4:10023062..10025452,3	K562	blood:

No data

Variant related genes	Relation type
SLC2A9	TF binding region
SLC2A9	CpG island
ENSG00000109667	Chromatin interaction
ENSG00000071127	Chromatin interaction

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11930870	1.00[EUR][1000 genomes]
rs55806494	1.00[EUR][1000 genomes]
rs55848003	1.00[EUR][1000 genomes]
rs56201573	1.00[EUR][1000 genomes]
rs56213107	1.00[EUR][1000 genomes]
rs57208919	1.00[EUR][1000 genomes]
rs58358578	1.00[EUR][1000 genomes]
rs58851167	1.00[EUR][1000 genomes]
rs61033604	1.00[EUR][1000 genomes]
rs61185580	1.00[EUR][1000 genomes]
rs61391968	1.00[EUR][1000 genomes]
rs73094403	1.00[EUR][1000 genomes]
rs73104537	1.00[EUR][1000 genomes]
rs73104548	1.00[EUR][1000 genomes]
rs73104560	1.00[EUR][1000 genomes]
rs73106519	1.00[EUR][1000 genomes]
rs73106525	1.00[EUR][1000 genomes]
rs73807236	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533218	chr4:9371016-10252290	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	74 gene(s)	inside rSNPs	diseases
2	nsv530090	chr4:9383695-10165033	Enhancers Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
3	nsv1014216	chr4:9713612-10223836	Transcr. at gene 5' and 3' Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
4	nsv1010249	chr4:9716101-10086188	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
5	nsv878681	chr4:9802853-10397327	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
6	nsv997941	chr4:9805223-10493388	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	54 gene(s)	inside rSNPs	diseases
7	nsv1008649	chr4:9805223-10589802	Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
8	nsv1000587	chr4:9805223-10610752	Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
9	nsv537022	chr4:9805223-10610752	Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
10	nsv1003454	chr4:9805223-10710990	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
11	nsv537023	chr4:9805223-10710990	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
12	nsv1004801	chr4:9814720-10674528	Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
13	nsv537024	chr4:9814720-10674528	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
14	nsv931483	chr4:9814721-10716463	Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
15	esv2763339	chr4:9858426-10056376	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
16	nsv537026	chr4:9903566-10262258	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
17	nsv1009972	chr4:9903566-10710990	Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
18	nsv537027	chr4:9903566-10710990	Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
19	esv2752052	chr4:9911872-10313111	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
20	nsv878688	chr4:9915850-10038112	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
21	nsv1010620	chr4:9937123-10686682	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
22	nsv530280	chr4:9947818-10940041	Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
23	nsv532706	chr4:9948018-10451450	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
24	nsv1013022	chr4:9961220-10230042	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
25	nsv537028	chr4:9961220-10230042	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
26	nsv537029	chr4:9961220-10262258	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
27	nsv878691	chr4:9966477-10418078	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
28	nsv1013487	chr4:9972011-10320963	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
29	nsv829857	chr4:9982514-10155835	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
30	nsv469621	chr4:9987670-10142287	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
31	nsv482719	chr4:9987670-10142287	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
32	nsv1008067	chr4:10004664-10262258	Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
33	nsv537030	chr4:10004664-10262258	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
34	nsv593691	chr4:10013173-10050141	Bivalent Enhancer Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
35	nsv869057	chr4:10013411-10875454	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	65 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:10010000-10021200	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr4:10019600-10022200	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr4:10020000-10021000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr4:10020000-10021000	Active TSS	Brain Anterior Caudate	brain
5	chr4:10020000-10021200	Active TSS	Fetal Brain Female	brain
6	chr4:10020000-10021400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr4:10020000-10021600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
8	chr4:10020200-10021000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr4:10020200-10021000	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
10	chr4:10020200-10021000	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
11	chr4:10020200-10021000	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr4:10020200-10021000	Active TSS	Primary T killer memory cells from peripheral blood	blood
13	chr4:10020200-10021000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr4:10020200-10021000	Active TSS	Aorta	Aorta
15	chr4:10020200-10021000	Active TSS	Brain Angular Gyrus	brain
16	chr4:10020200-10021000	Active TSS	Brain Cingulate Gyrus	brain
17	chr4:10020200-10021000	Active TSS	Brain Hippocampus Middle	brain
18	chr4:10020200-10021000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
19	chr4:10020200-10021000	Active TSS	Brain Substantia Nigra	brain
20	chr4:10020200-10021000	Active TSS	Duodenum Smooth Muscle	Duodenum
21	chr4:10020200-10021000	Active TSS	Left Ventricle	heart
22	chr4:10020200-10021000	Active TSS	Rectal Mucosa Donor 29	rectum
23	chr4:10020200-10021000	Active TSS	Rectal Mucosa Donor 31	rectum
24	chr4:10020200-10021000	Active TSS	Rectal Smooth Muscle	rectum
25	chr4:10020200-10021000	Active TSS	Right Atrium	heart
26	chr4:10020200-10021000	Active TSS	Thymus	Thymus
27	chr4:10020200-10021000	Active TSS	HSMM	muscle
28	chr4:10020200-10021200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr4:10020200-10021200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr4:10020200-10021200	Active TSS	Brain Inferior Temporal Lobe	brain
31	chr4:10020200-10021200	Active TSS	Colon Smooth Muscle	Colon
32	chr4:10020200-10021200	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
33	chr4:10020200-10021200	Active TSS	Ovary	ovary
34	chr4:10020200-10021200	Active TSS	Psoas Muscle	Psoas
35	chr4:10020200-10021400	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
36	chr4:10020200-10021400	Flanking Active TSS	Primary B cells from peripheral blood	blood
37	chr4:10020200-10021400	Flanking Active TSS	Primary T cells fromperipheralblood	blood
38	chr4:10020200-10021400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr4:10020200-10021400	Flanking Active TSS	Adipose Nuclei	Adipose
40	chr4:10020200-10021400	Flanking Active TSS	Colonic Mucosa	Colon
41	chr4:10020200-10021400	Active TSS	Fetal Kidney	kidney
42	chr4:10020200-10021400	Flanking Active TSS	Fetal Muscle Trunk	muscle
43	chr4:10020200-10021400	Flanking Active TSS	Fetal Muscle Leg	muscle
44	chr4:10020200-10024600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
45	chr4:10020400-10021000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr4:10020400-10021000	Active TSS	Primary T helper naive cells from peripheral blood	blood
47	chr4:10020400-10021000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
48	chr4:10020400-10021000	Active TSS	Esophagus	oesophagus
49	chr4:10020400-10021000	Active TSS	Fetal Intestine Small	intestine
50	chr4:10020400-10021000	Active TSS	Fetal Lung	lung

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