Variant report

Variant	rs610060
Chromosome Location	chr3:52273421-52273422
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:253)
CpG islands
(count:61)
Chromatin interactive
region (count:20)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:253 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr3:52273186-52273477	MCF-7	breast:	n/a	n/a
2	MYBL2	chr3:52271981-52273609	HepG2	liver:	n/a	n/a
3	POLR2A	chr3:52272639-52273767	GM18526	blood:	n/a	n/a
4	CHD1	chr3:52272945-52273810	GM12878	blood:	n/a	chr3:52273186-52273196
5	POLR2A	chr3:52272738-52273692	Hela-S3	cervix:	n/a	n/a
6	RELA	chr3:52272370-52273685	GM15510	blood:	n/a	n/a
7	HDAC2	chr3:52273220-52273456	K562	blood:	n/a	chr3:52273233-52273242 chr3:52273231-52273240
8	POLR2A	chr3:52272623-52273647	ProgFib	skin:	n/a	n/a
9	TAF1	chr3:52272661-52273722	H1-neurons	neurons:	n/a	n/a
10	CTBP2	chr3:52273060-52273642	H1-hESC	embryonic stem cell:	n/a	n/a
11	CTCF	chr3:52273324-52273435	GM12891	blood:	n/a	n/a
12	ZBTB7A	chr3:52272750-52273750	K562	blood:	n/a	chr3:52273517-52273528
13	POLR2A	chr3:52272259-52275014	GM12892	blood:	n/a	n/a
14	POLR2A	chr3:52272927-52273739	K562	blood:	n/a	n/a
15	POLR2A	chr3:52272918-52273649	GM12891	blood:	n/a	n/a
16	POLR2A	chr3:52272945-52273460	A549	lung:	n/a	n/a
17	ATF2	chr3:52273246-52273781	GM12878	blood:	n/a	n/a
18	MAX	chr3:52272434-52273766	SK-N-SH	brain:	n/a	chr3:52272927-52272937 chr3:52272941-52272951 chr3:52272692-52272702
19	ZNF143	chr3:52273072-52273539	Hela-S3	cervix:	n/a	chr3:52273154-52273164 chr3:52273212-52273230
20	POLR2A	chr3:52272388-52273727	GM12878	blood:	n/a	n/a
21	TAF1	chr3:52272917-52273533	A549	lung:	n/a	n/a
22	YY1	chr3:52273375-52273785	GM12892	blood:	n/a	n/a
23	NRF1	chr3:52272971-52273498	GM12878	blood:	n/a	chr3:52273242-52273253 chr3:52273231-52273242 chr3:52273231-52273245 chr3:52273188-52273197 chr3:52273228-52273242 chr3:52272981-52272990 chr3:52273231-52273242 chr3:52273233-52273242
24	POLR2A	chr3:52272440-52273751	HCT-116	colon:	n/a	n/a
25	MYC	chr3:52273031-52273548	MCF-7	breast:	n/a	n/a
26	POLR2A	chr3:52272495-52273726	GM18505	blood:	n/a	n/a
27	POLR2A	chr3:52272974-52275139	PBDE	blood:	n/a	n/a
28	MAX	chr3:52272344-52273769	A549	lung:	n/a	chr3:52272927-52272937 chr3:52272941-52272951 chr3:52272692-52272702
29	REST	chr3:52273213-52273579	A549	lung:	n/a	n/a
30	POLR2A	chr3:52272736-52273650	A549	lung:	n/a	n/a
31	TCF3	chr3:52272873-52273644	GM12878	blood:	n/a	n/a
32	POLR2A	chr3:52272659-52273747	GM18951	blood:	n/a	n/a
33	MTA3	chr3:52272162-52275133	GM12878	blood:	n/a	n/a
34	POLR2A	chr3:52272895-52273510	HepG2	liver:	n/a	n/a
35	POLR2A	chr3:52272644-52273741	GM12878	blood:	n/a	n/a
36	POLR2A	chr3:52272926-52273612	GM12878	blood:	n/a	n/a
37	HDAC2	chr3:52272991-52273747	H1-hESC	embryonic stem cell:	n/a	chr3:52273233-52273242 chr3:52273231-52273240
38	HEY1	chr3:52272945-52273732	HepG2	liver:	n/a	chr3:52273182-52273197 chr3:52273231-52273246 chr3:52273173-52273188
39	POLR2A	chr3:52272891-52273608	PANC-1	pancreas:	n/a	n/a
40	ZNF384	chr3:52273304-52273650	K562	blood:	n/a	n/a
41	MYC	chr3:52272256-52273697	K562	blood:	n/a	chr3:52272927-52272937 chr3:52272941-52272951 chr3:52272692-52272702
42	SMC3	chr3:52273282-52273771	GM12878	blood:	n/a	n/a
43	EGR1	chr3:52273091-52273476	GM12878	blood:	n/a	chr3:52273189-52273202 chr3:52273187-52273197 chr3:52273233-52273242 chr3:52273232-52273241
44	REST	chr3:52272922-52273511	SK-N-SH	brain:	n/a	n/a
45	PML	chr3:52273210-52273486	GM12878	blood:	n/a	n/a
46	STAT1	chr3:52273073-52273680	GM12878	blood:	n/a	n/a
47	EBF1	chr3:52273400-52273757	GM12878	blood:	n/a	chr3:52273536-52273546
48	POLR2A	chr3:52272927-52273469	Hela-S3	cervix:	n/a	n/a
49	POLR2A	chr3:52272416-52275284	PFSK-1	brain:	n/a	n/a
50	POLR2A	chr3:52272856-52273747	PANC-1	pancreas:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:52273381-52273431	MCF-7	breast:	n/a
2	chr3:52273381-52273431	U87	brain:	n/a
3	chr3:52273381-52273431	PrEC	prostate:	n/a
4	chr3:52273381-52273431	ECC-1	luminal epithelium:	n/a
5	chr3:52273381-52273431	T-47D	breast:	n/a
6	chr3:52273381-52273431	GM06990	blood:	n/a
7	chr3:52273381-52273431	BE2_C	brain:	n/a
8	chr3:52273381-52273431	HEK293	kidney:	embryo
9	chr3:52273381-52273431	IMR90	lung:	fetal
10	chr3:52273381-52273431	HCT-116	colon:	n/a
11	chr3:52273381-52273431	RPTEC	kidney:	n/a
12	chr3:52273381-52273431	Hela-S3	cervix:	n/a
13	chr3:52273381-52273431	SK-N-SH_RA	brain:	n/a
14	chr3:52273381-52273431	GM19239	blood:	n/a
15	chr3:52273381-52273431	HPAEpiC	pulmonary alveolar:	n/a
16	chr3:52273381-52273431	NHDF-neo	bronchial:	n/a
17	chr3:52273381-52273431	AoSMC	blood vessel:	n/a
18	chr3:52273381-52273431	Hepatocyte	liver:	n/a
19	chr3:52273381-52273431	ProgFib	skin:	n/a
20	chr3:52273381-52273431	BJ	skin:	n/a
21	chr3:52273381-52273431	HRPEpiC	eye:	n/a
22	chr3:52273381-52273431	HRE	kidney:	n/a
23	chr3:52273381-52273431	GM12891	blood:	n/a
24	chr3:52273381-52273431	HCM	heart:	n/a
25	chr3:52273381-52273431	K562	blood:	n/a
26	chr3:52273381-52273431	SK-N-SH	brain:	n/a
27	chr3:52273381-52273431	HNPCEpiC	eye:	n/a
28	chr3:52273381-52273431	HMEC	breast:	n/a
29	chr3:52273381-52273431	HepG2	liver:	n/a
30	chr3:52273381-52273431	NT2-D1	testis:	n/a
31	chr3:52273381-52273431	AG09319	gingival:	n/a
32	chr3:52273381-52273431	PANC-1	pancreas:	n/a
33	chr3:52273381-52273431	NB4	blood:	n/a
34	chr3:52273381-52273431	ovcar-3	ovarian:	n/a
35	chr3:52273381-52273431	HEEpiC	esophagus:	n/a
36	chr3:52273381-52273431	HL-60	blood:	n/a
37	chr3:52273381-52273431	SK-N-MC	brain:	n/a
38	chr3:52273381-52273431	Caco-2	colon:	n/a
39	chr3:52273381-52273431	AG04450	lung:	fetal
40	chr3:52273381-52273431	A549	lung:	n/a
41	chr3:52273381-52273431	CMK	blood:	n/a
42	chr3:52273381-52273431	HCF	heart:	n/a
43	chr3:52273381-52273431	HAEpiC	amniotic membrane:	n/a
44	chr3:52273381-52273431	MCF10A-Er-Src	breast:	n/a
45	chr3:52273381-52273431	H1-hESC	embryonic stem cell:	embryo
46	chr3:52273381-52273431	PFSK-1	brain:	n/a
47	chr3:52273381-52273431	HCPEpiC	choroid plexus:	n/a
48	chr3:52273381-52273431	AG09309	skin:	n/a
49	chr3:52273381-52273431	NHBE	bronchial:	n/a
50	chr3:52273381-52273431	SAEC	small airway:	n/a

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:52272619..52275147-chr3:52443057..52446254,5	K562	blood:
2	chr3:52272390..52274822-chr3:52406008..52407949,2	K562	blood:
3	chr3:52258495..52260417-chr3:52270496..52273485,2	MCF-7	breast:
4	chr3:52259472..52263342-chr3:52269626..52274061,4	MCF-7	breast:
5	chr3:52271022..52275105-chr3:52320320..52325575,6	K562	blood:
6	chr3:52271015..52274727-chr3:52321912..52324165,4	K562	blood:
7	chr3:52271478..52274801-chr3:52443057..52446273,4	K562	blood:
8	chr3:52270811..52274971-chr3:52310538..52315239,11	K562	blood:
9	chr3:52262375..52268246-chr3:52270366..52274345,8	K562	blood:
10	chr3:52270811..52276588-chr3:52310648..52314131,11	K562	blood:
11	chr3:52273199..52273773-chr4:120133265..120133955,2	NB4	blood:
12	chr3:52273329..52274998-chr3:52327132..52329957,2	MCF-7	breast:
13	chr3:52027463..52030131-chr3:52273399..52277503,3	K562	blood:
14	chr3:52264729..52268939-chr3:52269297..52274565,7	K562	blood:
15	chr2:263992..264836-chr3:52272875..52273459,2	HCT-116	colon:
16	chr3:52273385..52273886-chr3:133378506..133379006,2	NB4	blood:
17	chr3:52269470..52276026-chr3:52310334..52314212,10	MCF-7	breast:
18	chr3:52272807..52274330-chr3:52300733..52302349,2	MCF-7	breast:
19	chr3:52269533..52276077-chr3:52310385..52313504,11	MCF-7	breast:
20	chr3:52272181..52276088-chr3:52318615..52323958,11	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PPM1M-2	chr3:52273288-52273451	NONHSAT089901

No data

Variant related genes	Relation type
TWF2	TF binding region
TLR9	TF binding region
TWF2	CpG island
TLR9	CpG island
ENSG00000173366	Chromatin interaction
ENSG00000207926	Chromatin interaction
ENSG00000162244	Chromatin interaction
ENSG00000178636	Chromatin interaction
ENSG00000035115	Chromatin interaction
ENSG00000239557	Chromatin interaction
ENSG00000143727	Chromatin interaction
ENSG00000168237	Chromatin interaction
ENSG00000163930	Chromatin interaction
ENSG00000247596	Chromatin interaction
ENSG00000010318	Chromatin interaction
ENSG00000145390	Chromatin interaction
ENSG00000164091	Chromatin interaction
ENSG00000239732	Chromatin interaction

Extended variants
information (count: 53 )
Associated
traits (count: 17 )

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs1060330	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.95[TSI][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1077142	0.80[LWK][hapmap];0.89[MKK][hapmap]
rs11717383	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13091545	0.80[LWK][hapmap];0.87[MKK][hapmap]
rs13094687	0.91[CHB][hapmap];0.86[CHD][hapmap];0.90[JPT][hapmap]
rs164640	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs181274	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs187084	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs2272088	0.86[CHB][hapmap];0.86[CHD][hapmap];0.90[JPT][hapmap]
rs2276834	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34569561	0.95[CHB][hapmap];0.83[CHD][hapmap];0.95[JPT][hapmap]
rs352139	0.81[CHB][hapmap];0.85[GIH][hapmap];0.82[JPT][hapmap];0.80[EUR][1000 genomes]
rs352140	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352158	0.81[CHB][hapmap]
rs352162	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352163	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352165	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352166	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352167	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352168	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352169	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352170	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs352171	0.81[CHB][hapmap]
rs353547	0.90[CHB][hapmap];0.90[CHD][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs35860312	0.80[LWK][hapmap];0.87[MKK][hapmap]
rs3844291	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs3852064	0.95[CHB][hapmap];0.88[CHD][hapmap];0.90[JPT][hapmap]
rs411457	0.86[CHB][hapmap]
rs498946	0.83[MKK][hapmap]
rs524986	0.81[CHB][hapmap]
rs614288	0.81[CHB][hapmap]
rs6445358	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs648514	0.85[CEU][hapmap];0.87[MEX][hapmap]
rs730050	0.90[CHB][hapmap];0.95[CHD][hapmap];0.91[JPT][hapmap];0.92[MEX][hapmap]
rs7614727	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7618915	0.95[CHB][hapmap];0.83[CHD][hapmap];0.95[JPT][hapmap]
rs7622851	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7629072	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7643570	0.80[LWK][hapmap];0.85[MKK][hapmap]
rs9311474	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519445	chr3:52004317-52367932	Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	nsv984541	chr3:52055970-52285682	Genic enhancers Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	nsv470572	chr3:52123313-52350212	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	103 gene(s)	inside rSNPs	diseases
4	nsv460537	chr3:52148233-52290550	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
5	nsv590301	chr3:52148233-52290550	Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
6	nsv508218	chr3:52155869-52290410	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
7	nsv834694	chr3:52178983-52335821	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	102 gene(s)	inside rSNPs	diseases
8	nsv834695	chr3:52199701-52400577	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	98 gene(s)	inside rSNPs	diseases
9	nsv876787	chr3:52236762-52367932	Genic enhancers Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
10	nsv876788	chr3:52247110-52367932	Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	90 gene(s)	inside rSNPs	diseases
11	nsv876789	chr3:52247110-52575831	Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
12	nsv876790	chr3:52261382-52286825	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
13	nsv876791	chr3:52269491-52286825	Strong transcription Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

mRNA abundance (count:17)

SNP	Gene	Cis/trans	Tissue	Source
rs610060	NT5DC2	cis	lymphoblastoid	seeQTL
rs610060	GNL3	cis	cerebellum	SCAN
rs610060	DNAH1	cis	cerebellum	SCAN
rs610060	CACNA2D3	cis	parietal	SCAN
rs610060	NT5DC2	Cis_1M	lymphoblastoid	RTeQTL
rs610060	SPCS1	cis	parietal	SCAN
rs610060	SEMA3G	cis	cerebellum	SCAN
rs610060	RBM6	cis	cerebellum	SCAN
rs610060	GLYCTK	cis	parietal	SCAN
rs610060	NEK4	cis	cerebellum	SCAN
rs610060	NDUFAF3	cis	parietal	SCAN
rs610060	GLYCTK	cis	Whole Blood	GTEx
rs610060	RBM6	cis	parietal	SCAN
rs610060	NEK4	cis	parietal	SCAN
rs610060	ITIH4	cis	parietal	SCAN
rs610060	GNL3	cis	parietal	SCAN
rs610060	SEMA3G	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52271800-52274200	Active TSS	HUES48 Cell Line	embryonic stem cell
2	chr3:52272000-52273800	Active TSS	Aorta	Aorta
3	chr3:52272200-52273800	Active TSS	Ovary	ovary
4	chr3:52272200-52274000	Active TSS	Pancreatic Islets	Pancreatic Islet
5	chr3:52272200-52274200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr3:52272400-52273600	Active TSS	Sigmoid Colon	Sigmoid Colon
7	chr3:52272400-52273800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
8	chr3:52272400-52273800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr3:52272400-52274000	Active TSS	NHDF-Ad	bronchial
10	chr3:52272400-52274000	Active TSS	NHLF	lung
11	chr3:52272400-52274200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr3:52272600-52273600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr3:52272600-52273600	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
14	chr3:52272600-52273600	Active TSS	Muscle Satellite Cultured Cells	--
15	chr3:52272600-52273600	Active TSS	Fetal Muscle Trunk	muscle
16	chr3:52272600-52273600	Active TSS	Left Ventricle	heart
17	chr3:52272600-52273800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr3:52272600-52273800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr3:52272600-52273800	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
20	chr3:52272600-52273800	Active TSS	Primary T helper naive cells from peripheral blood	blood
21	chr3:52272600-52273800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
22	chr3:52272600-52273800	Active TSS	Primary T killer memory cells from peripheral blood	blood
23	chr3:52272600-52273800	Active TSS	Lung	lung
24	chr3:52272600-52273800	Active TSS	Placenta Amnion	Placenta Amnion
25	chr3:52272600-52273800	Active TSS	Psoas Muscle	Psoas
26	chr3:52272600-52273800	Active TSS	Small Intestine	intestine
27	chr3:52272600-52273800	Active TSS	Thymus	Thymus
28	chr3:52272600-52274000	Active TSS	iPS-20b Cell Line	embryonic stem cell
29	chr3:52272600-52274000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr3:52272600-52274000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr3:52272600-52274000	Active TSS	GM12878-XiMat	blood
32	chr3:52272600-52274000	Active TSS	HSMM	muscle
33	chr3:52272600-52274000	Active TSS	NHEK	skin
34	chr3:52272600-52274200	Active TSS	ES-I3 Cell Line	embryonic stem cell
35	chr3:52272600-52274200	Active TSS	HUES64 Cell Line	embryonic stem cell
36	chr3:52272600-52274200	Active TSS	A549	lung
37	chr3:52272600-52274400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr3:52272800-52273600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr3:52272800-52273600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr3:52272800-52273600	Active TSS	Primary monocytes fromperipheralblood	blood
41	chr3:52272800-52273600	Active TSS	Primary neutrophils fromperipheralblood	blood
42	chr3:52272800-52273600	Active TSS	Primary B cells from peripheral blood	blood
43	chr3:52272800-52273600	Active TSS	Primary T cells fromperipheralblood	blood
44	chr3:52272800-52273600	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
45	chr3:52272800-52273600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr3:52272800-52273600	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
47	chr3:52272800-52273600	Active TSS	Cortex derived primary cultured neurospheres	brain
48	chr3:52272800-52273600	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr3:52272800-52273600	Active TSS	Brain Anterior Caudate	brain
50	chr3:52272800-52273600	Active TSS	Brain Substantia Nigra	brain

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