Variant report

Variant rs7618915
Chromosome Location chr3:52279594-52279595
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52277600-52279600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:52277600-52279600 Enhancers HMEC breast
3 chr3:52277600-52282000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
4 chr3:52278000-52279600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
5 chr3:52278000-52279600 Flanking Active TSS Hela-S3 cervix
6 chr3:52278200-52279600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
7 chr3:52278400-52280600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr3:52278600-52279600 Flanking Active TSS Primary monocytes fromperipheralblood blood
9 chr3:52278800-52279600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr3:52278800-52279600 Flanking Active TSS Primary B cells from cord blood blood
11 chr3:52278800-52279600 Flanking Active TSS Primary T cells from cord blood blood
12 chr3:52278800-52279600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
13 chr3:52278800-52279600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr3:52278800-52279600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
15 chr3:52278800-52279600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
16 chr3:52278800-52279600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
17 chr3:52278800-52279600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr3:52278800-52279600 Flanking Active TSS Duodenum Mucosa Duodenum
19 chr3:52278800-52279600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
20 chr3:52278800-52279600 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
21 chr3:52278800-52279600 Flanking Active TSS GM12878-XiMat blood
22 chr3:52278800-52280800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr3:52278800-52281400 Flanking Active TSS Adipose Nuclei Adipose
24 chr3:52279000-52279600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr3:52279000-52279600 Flanking Active TSS Primary B cells from peripheral blood blood
26 chr3:52279000-52279600 Flanking Active TSS Primary T cells fromperipheralblood blood
27 chr3:52279000-52279600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
28 chr3:52279000-52279600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
29 chr3:52279000-52279600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
30 chr3:52279000-52279600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
31 chr3:52279000-52279600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
32 chr3:52279000-52279600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
33 chr3:52279000-52279600 Flanking Active TSS Muscle Satellite Cultured Cells --
34 chr3:52279000-52279600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr3:52279000-52279600 Flanking Active TSS Brain Anterior Caudate brain
36 chr3:52279000-52279600 Flanking Active TSS Brain Cingulate Gyrus brain
37 chr3:52279000-52279600 Flanking Active TSS Brain Inferior Temporal Lobe brain
38 chr3:52279000-52279600 Flanking Active TSS Colonic Mucosa Colon
39 chr3:52279000-52279600 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
40 chr3:52279000-52279600 Flanking Active TSS Fetal Lung lung
41 chr3:52279000-52279600 Flanking Active TSS Fetal Muscle Leg muscle
42 chr3:52279000-52279600 Flanking Active TSS Placenta Placenta
43 chr3:52279000-52279600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
44 chr3:52279000-52279600 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
45 chr3:52279000-52279600 Flanking Active TSS Stomach Smooth Muscle stomach
46 chr3:52279000-52279600 Flanking Active TSS Spleen Spleen
47 chr3:52279000-52279600 Flanking Active TSS HepG2 liver
48 chr3:52279000-52279800 Flanking Active TSS Primary hematopoietic stem cells blood
49 chr3:52279000-52280400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr3:52279000-52280400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell

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