The 2.0 version of rSNPBase

Variant report

Variant rs61007952
Chromosome Location chr3:113108933-113108934
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113042200-113116800 Weak transcription Primary B cells from cord blood blood
2 chr3:113066400-113117600 Weak transcription Fetal Muscle Leg muscle
3 chr3:113068400-113117000 Weak transcription Thymus Thymus
4 chr3:113072400-113117200 Weak transcription Primary T cells fromperipheralblood blood
5 chr3:113074400-113184400 Weak transcription Hela-S3 cervix
6 chr3:113078600-113109800 Weak transcription Fetal Muscle Trunk muscle
7 chr3:113080000-113114200 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr3:113080000-113123800 Weak transcription Primary B cells from peripheral blood blood
9 chr3:113080200-113117600 Weak transcription Psoas Muscle Psoas
10 chr3:113080800-113143800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr3:113081600-113121200 Weak transcription Ovary ovary
12 chr3:113081600-113121200 Weak transcription Pancreas Pancrea
13 chr3:113081800-113116600 Weak transcription Stomach Smooth Muscle stomach
14 chr3:113082200-113113200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr3:113090800-113121200 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr3:113092400-113134200 Weak transcription Fetal Kidney kidney
17 chr3:113093600-113134800 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr3:113096600-113121200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr3:113097800-113117800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr3:113098200-113117000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr3:113098800-113134800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr3:113099000-113134800 Weak transcription A549 lung
23 chr3:113099400-113113400 Weak transcription Left Ventricle heart
24 chr3:113099600-113144800 Weak transcription Rectal Smooth Muscle rectum
25 chr3:113101800-113121200 Weak transcription Primary hematopoietic stem cells blood
26 chr3:113102200-113148800 Weak transcription Brain Angular Gyrus brain
27 chr3:113102400-113144400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr3:113102800-113122600 Weak transcription Spleen Spleen
29 chr3:113103200-113126200 Weak transcription Right Ventricle heart
30 chr3:113104000-113117000 Weak transcription Adipose Nuclei Adipose
31 chr3:113104000-113117600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr3:113104000-113127400 Weak transcription Duodenum Mucosa Duodenum
33 chr3:113105200-113122000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr3:113105600-113124200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr3:113106600-113110400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr3:113106800-113117800 Weak transcription Lung lung
37 chr3:113106800-113122000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr3:113106800-113143600 Weak transcription Dnd41 blood
39 chr3:113107000-113121800 Weak transcription Fetal Intestine Large intestine
40 chr3:113107000-113127400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr3:113107000-113137000 Weak transcription Esophagus oesophagus
42 chr3:113107200-113112400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr3:113107200-113117000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr3:113107200-113122000 Weak transcription Gastric stomach
45 chr3:113107200-113124200 Weak transcription Fetal Stomach stomach
46 chr3:113107200-113124200 Weak transcription GM12878-XiMat blood
47 chr3:113107200-113124600 Weak transcription Fetal Intestine Small intestine
48 chr3:113107200-113145200 Weak transcription Aorta Aorta
49 chr3:113107600-113138200 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr3:113107800-113112000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015