The 2.0 version of rSNPBase

Variant report

Variant rs6776941
Chromosome Location chr3:113048737-113048738
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113013600-113065200 Weak transcription Left Ventricle heart
2 chr3:113024600-113081000 Weak transcription Stomach Smooth Muscle stomach
3 chr3:113028600-113053400 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr3:113034800-113053600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr3:113034800-113054000 Weak transcription Psoas Muscle Psoas
6 chr3:113035000-113050800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr3:113035000-113052000 Weak transcription HSMMtube muscle
8 chr3:113035000-113053000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr3:113035400-113052800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:113036400-113053400 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr3:113036400-113055600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr3:113036600-113049800 Weak transcription Fetal Intestine Large intestine
13 chr3:113036600-113051000 Weak transcription Thymus Thymus
14 chr3:113036600-113081000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr3:113036800-113050000 Weak transcription Right Ventricle heart
16 chr3:113036800-113050400 Weak transcription Lung lung
17 chr3:113036800-113065600 Weak transcription Aorta Aorta
18 chr3:113036800-113073600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:113036800-113081000 Weak transcription Gastric stomach
20 chr3:113036800-113088600 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr3:113037000-113053600 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr3:113037800-113065600 Weak transcription HSMM muscle
23 chr3:113042000-113080800 Weak transcription Ovary ovary
24 chr3:113042200-113116800 Weak transcription Primary B cells from cord blood blood
25 chr3:113042400-113059800 Weak transcription Pancreas Pancrea
26 chr3:113042400-113103600 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr3:113043800-113065600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:113045200-113048800 Weak transcription Primary hematopoietic stem cells blood
29 chr3:113045200-113048800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr3:113045200-113050600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr3:113045400-113049200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:113045400-113050000 Weak transcription Fetal Kidney kidney
33 chr3:113045400-113050800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr3:113045400-113051400 Weak transcription Liver Liver
35 chr3:113045400-113053000 Weak transcription Brain Anterior Caudate brain
36 chr3:113045400-113055400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:113045400-113097600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr3:113045600-113073000 Weak transcription A549 lung
39 chr3:113046600-113049600 Weak transcription Fetal Muscle Leg muscle
40 chr3:113048000-113050200 Strong transcription Primary T cells from cord blood blood
41 chr3:113048200-113048800 Enhancers Adipose Nuclei Adipose
42 chr3:113048600-113050600 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015