The 2.0 version of rSNPBase

Variant report

Variant rs61021737
Chromosome Location chr2:172186910-172186911
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172169200-172193400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:172170200-172192800 Weak transcription Fetal Intestine Large intestine
3 chr2:172171400-172190800 Weak transcription Esophagus oesophagus
4 chr2:172171800-172211600 Weak transcription Fetal Intestine Small intestine
5 chr2:172172600-172190600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr2:172172800-172190600 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr2:172172800-172222400 Weak transcription Fetal Muscle Trunk muscle
8 chr2:172175400-172187600 Weak transcription Fetal Muscle Leg muscle
9 chr2:172175600-172188000 Weak transcription Adipose Nuclei Adipose
10 chr2:172176000-172187800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:172176200-172198600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr2:172178000-172190600 Weak transcription Left Ventricle heart
13 chr2:172180000-172195800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr2:172180600-172190800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr2:172180600-172203400 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr2:172180800-172193000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr2:172180800-172198200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:172181000-172188000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr2:172181000-172203800 Weak transcription HMEC breast
20 chr2:172181000-172221600 Weak transcription K562 blood
21 chr2:172181200-172198000 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr2:172181200-172204200 Weak transcription NHEK skin
23 chr2:172181800-172187200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:172182800-172193200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr2:172183000-172188200 Enhancers Primary B cells from peripheral blood blood
26 chr2:172183800-172197200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:172184000-172187000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr2:172184000-172190200 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr2:172184000-172195800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr2:172184000-172197800 Weak transcription Primary hematopoietic stem cells blood
31 chr2:172184000-172198000 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr2:172184000-172203400 Weak transcription NH-A brain
33 chr2:172184200-172193200 Weak transcription Primary T cells from cord blood blood
34 chr2:172184600-172190600 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr2:172184600-172190600 Weak transcription Colon Smooth Muscle Colon
36 chr2:172184600-172203200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr2:172184800-172187000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:172184800-172189000 Weak transcription Primary T cells fromperipheralblood blood
39 chr2:172184800-172195600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr2:172184800-172195800 Weak transcription H1 Cell Line embryonic stem cell
41 chr2:172184800-172203200 Weak transcription Fetal Thymus thymus
42 chr2:172184800-172203200 Weak transcription Rectal Smooth Muscle rectum
43 chr2:172185000-172187400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr2:172185000-172190000 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr2:172185000-172190600 Weak transcription HepG2 liver
46 chr2:172185000-172190800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr2:172185000-172193000 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr2:172185000-172200400 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr2:172185000-172202200 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr2:172186600-172187600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015