Variant report
Variant | rs6111025 |
---|---|
Chromosome Location | chr20:16275485-16275486 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr20:16247600-16290800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
2 | chr20:16248600-16291400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
3 | chr20:16249200-16277400 | Weak transcription | Brain Substantia Nigra | brain |
4 | chr20:16252000-16289400 | Weak transcription | Rectal Smooth Muscle | rectum |
5 | chr20:16252400-16283000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
6 | chr20:16253000-16277800 | Weak transcription | Brain Angular Gyrus | brain |
7 | chr20:16254000-16278800 | Weak transcription | Adipose Nuclei | Adipose |
8 | chr20:16254000-16281400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
9 | chr20:16254000-16290800 | Weak transcription | Esophagus | oesophagus |
10 | chr20:16254000-16298400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
11 | chr20:16254200-16278600 | Weak transcription | Pancreas | Pancrea |
12 | chr20:16254200-16284200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
13 | chr20:16255400-16283000 | Weak transcription | Fetal Lung | lung |
14 | chr20:16262600-16285400 | Weak transcription | Ovary | ovary |
15 | chr20:16262600-16346200 | Weak transcription | Gastric | stomach |
16 | chr20:16263600-16277200 | Weak transcription | Stomach Smooth Muscle | stomach |
17 | chr20:16264400-16281600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
18 | chr20:16264600-16284000 | Weak transcription | Aorta | Aorta |
19 | chr20:16264800-16290800 | Weak transcription | Lung | lung |
20 | chr20:16265000-16283800 | Weak transcription | Primary B cells from cord blood | blood |
21 | chr20:16265000-16289000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
22 | chr20:16265200-16281200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
23 | chr20:16265200-16282600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
24 | chr20:16265600-16280600 | Weak transcription | Primary B cells from peripheral blood | blood |
25 | chr20:16265600-16281400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
26 | chr20:16265600-16281600 | Weak transcription | Duodenum Mucosa | Duodenum |
27 | chr20:16265600-16282000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
28 | chr20:16265600-16282000 | Weak transcription | Fetal Intestine Small | intestine |
29 | chr20:16265600-16282800 | Weak transcription | Fetal Muscle Trunk | muscle |
30 | chr20:16265600-16284200 | Weak transcription | Left Ventricle | heart |
31 | chr20:16265800-16282200 | Weak transcription | Psoas Muscle | Psoas |
32 | chr20:16265800-16289200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
33 | chr20:16268800-16277400 | Weak transcription | Fetal Muscle Leg | muscle |
34 | chr20:16270800-16275800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
35 | chr20:16270800-16302400 | Weak transcription | Brain Hippocampus Middle | brain |
36 | chr20:16271400-16277600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
37 | chr20:16271600-16280200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
38 | chr20:16274400-16277000 | Enhancers | HepG2 | liver |
39 | chr20:16275000-16276400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
40 | chr20:16275400-16275600 | ZNF genes & repeats | Spleen | Spleen |
41 | chr20:16275400-16278400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |