Variant report

Variant rs611896
Chromosome Location chr13:30894060-30894061
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30882200-30896200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr13:30882200-30896200 Weak transcription Ovary ovary
3 chr13:30882200-30910800 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr13:30882400-30894800 Weak transcription Fetal Intestine Small intestine
5 chr13:30882400-30905400 Weak transcription Right Ventricle heart
6 chr13:30882400-30905400 Weak transcription Stomach Smooth Muscle stomach
7 chr13:30884600-30896000 Enhancers Fetal Heart heart
8 chr13:30885000-30894600 Weak transcription Aorta Aorta
9 chr13:30886000-30898400 Weak transcription Lung lung
10 chr13:30886800-30896800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr13:30886800-30900000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr13:30888000-30903400 Weak transcription Fetal Thymus thymus
13 chr13:30888000-30909600 Weak transcription Thymus Thymus
14 chr13:30889400-30899400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr13:30889400-30906400 Weak transcription Primary B cells from cord blood blood
16 chr13:30889600-30898000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr13:30889600-30902400 Weak transcription Primary hematopoietic stem cells blood
18 chr13:30892000-30894200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr13:30892000-30894200 Enhancers Adipose Nuclei Adipose
20 chr13:30892000-30894200 Enhancers Fetal Muscle Leg muscle
21 chr13:30892000-30894400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr13:30892000-30894400 Enhancers Rectal Smooth Muscle rectum
23 chr13:30892000-30894800 Enhancers Brain Anterior Caudate brain
24 chr13:30892000-30895200 Enhancers Brain Inferior Temporal Lobe brain
25 chr13:30892000-30895800 Enhancers Brain Cingulate Gyrus brain
26 chr13:30892200-30895000 Enhancers Brain Substantia Nigra brain
27 chr13:30892200-30895200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr13:30892400-30894200 Enhancers Cortex derived primary cultured neurospheres brain
29 chr13:30892400-30894800 Enhancers Colon Smooth Muscle Colon
30 chr13:30892400-30896800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr13:30892600-30894200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr13:30892800-30896800 Weak transcription Left Ventricle heart
33 chr13:30892800-30897800 Weak transcription Right Atrium heart
34 chr13:30892800-30913400 Weak transcription Psoas Muscle Psoas
35 chr13:30893200-30894200 Enhancers Skeletal Muscle Male skeletal muscle
36 chr13:30893400-30894200 Enhancers NHLF lung
37 chr13:30893400-30895200 Enhancers Brain Angular Gyrus brain
38 chr13:30893800-30894200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr13:30893800-30894200 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr13:30893800-30894200 Enhancers Muscle Satellite Cultured Cells --
41 chr13:30893800-30894200 Flanking Active TSS Brain Hippocampus Middle brain
42 chr13:30893800-30894200 Enhancers HMEC breast
43 chr13:30893800-30894200 Enhancers HSMM muscle
44 chr13:30893800-30894200 Enhancers NH-A brain
45 chr13:30893800-30894200 Enhancers Osteobl bone
46 chr13:30893800-30894400 Enhancers HSMMtube muscle
47 chr13:30894000-30894200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr13:30894000-30894200 Enhancers Skeletal Muscle Female skeletal muscle
49 chr13:30894000-30894800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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