Variant report

Variant	rs61192266
Chromosome Location	chr14:72992964-72992965
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:72991831..72993814-chr14:72995434..72997044,2	MCF-7	breast:
2	chr14:72990881..72993207-chr14:72993886..72996704,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs4441203	0.97[ASN][1000 genomes]
rs56771173	0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs59245863	0.91[ASN][1000 genomes]
rs60642139	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs74063449	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
3	esv1843592	chr14:72967991-73007547	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72979400-72995400	Weak transcription	Left Ventricle	heart
2	chr14:72983600-72995000	Weak transcription	Colonic Mucosa	Colon
3	chr14:72984000-72994800	Strong transcription	Cortex derived primary cultured neurospheres	brain
4	chr14:72984200-72994400	Weak transcription	Fetal Stomach	stomach
5	chr14:72984400-73011000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr14:72984800-72995400	Weak transcription	Osteobl	bone
7	chr14:72986400-72995000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:72986800-72996200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr14:72989000-72993400	Weak transcription	GM12878-XiMat	blood
10	chr14:72989200-72995800	Enhancers	Primary B cells from peripheral blood	blood
11	chr14:72989400-72994600	Enhancers	HSMMtube	muscle
12	chr14:72989600-72995200	Enhancers	Monocytes-CD14+_RO01746	blood
13	chr14:72989800-72993600	Enhancers	Adipose Nuclei	Adipose
14	chr14:72989800-72996000	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr14:72989800-72997600	Enhancers	HSMM	muscle
16	chr14:72990000-72993600	Weak transcription	HMEC	breast
17	chr14:72990000-72994000	Enhancers	Muscle Satellite Cultured Cells	--
18	chr14:72990200-72995400	Weak transcription	NHLF	lung
19	chr14:72991000-72994600	Weak transcription	Liver	Liver
20	chr14:72991200-72995000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr14:72991200-72995200	Weak transcription	Fetal Brain Male	brain
22	chr14:72991200-72998600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
23	chr14:72991200-72998800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
24	chr14:72991400-72998200	Weak transcription	Primary T helper cells fromperipheralblood	blood
25	chr14:72991400-73001600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr14:72991800-72995000	Weak transcription	Fetal Thymus	thymus
27	chr14:72991800-72997600	Weak transcription	Primary T helper cells PMA-I stimulated	--
28	chr14:72992200-72993800	Weak transcription	Ovary	ovary
29	chr14:72992200-72994400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr14:72992200-72998000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
31	chr14:72992200-73001400	Weak transcription	Spleen	Spleen
32	chr14:72992400-72993800	Enhancers	Primary B cells from cord blood	blood
33	chr14:72992600-72995000	Weak transcription	HUVEC	blood vessel
34	chr14:72992600-72995000	Weak transcription	NH-A	brain
35	chr14:72992600-72995400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
36	chr14:72992600-72995400	Weak transcription	Fetal Muscle Leg	muscle

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