Variant report

Variant	rs61203173
Chromosome Location	chr8:100795388-100795389
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:100794282..100798252-chr8:100798462..100800680,3	K562	blood:
2	chr8:100790764..100793031-chr8:100793544..100795545,2	K562	blood:
3	chr8:100793137..100796004-chr8:100796394..100798372,2	MCF-7	breast:
4	chr8:100795017..100797456-chr8:100799180..100802849,3	K562	blood:
5	chr8:100794504..100797670-chr8:100804207..100806465,3	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs57994419	1.00[AFR][1000 genomes]
rs60978823	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019256	chr8:100336249-100852803	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	nsv539698	chr8:100336249-100852803	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
3	esv2758167	chr8:100404151-100838624	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
4	esv2759633	chr8:100404151-100838624	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
5	nsv1029616	chr8:100442135-100796643	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
6	nsv1033944	chr8:100737321-100916345	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
7	esv1830910	chr8:100791156-101114794	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:100734600-100796600	Weak transcription	Pancreas	Pancrea
2	chr8:100763600-100796600	Weak transcription	HSMMtube	muscle
3	chr8:100766200-100798000	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr8:100766200-100815600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr8:100769000-100798200	Weak transcription	Psoas Muscle	Psoas
6	chr8:100772000-100798000	Weak transcription	Rectal Smooth Muscle	rectum
7	chr8:100772400-100824400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr8:100775000-100822400	Weak transcription	Duodenum Mucosa	Duodenum
9	chr8:100776600-100805800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr8:100777600-100807800	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr8:100777600-100809600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr8:100777800-100807200	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr8:100778000-100806400	Weak transcription	Brain Hippocampus Middle	brain
14	chr8:100778400-100857800	Weak transcription	Spleen	Spleen
15	chr8:100778600-100796600	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr8:100779800-100801800	Weak transcription	Fetal Brain Male	brain
17	chr8:100780000-100795600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
18	chr8:100780200-100796600	Weak transcription	Fetal Muscle Trunk	muscle
19	chr8:100780400-100796600	Weak transcription	Primary monocytes fromperipheralblood	blood
20	chr8:100780400-100799000	Weak transcription	Thymus	Thymus
21	chr8:100780400-100810200	Weak transcription	Aorta	Aorta
22	chr8:100780400-100810600	Weak transcription	Duodenum Smooth Muscle	Duodenum
23	chr8:100780400-100816400	Weak transcription	Lung	lung
24	chr8:100780600-100799800	Weak transcription	Brain Cingulate Gyrus	brain
25	chr8:100780600-100801200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
26	chr8:100780600-100802800	Weak transcription	Dnd41	blood
27	chr8:100780600-100810200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr8:100783200-100795800	Weak transcription	Primary B cells from peripheral blood	blood
29	chr8:100783200-100796800	Weak transcription	Rectal Mucosa Donor 31	rectum
30	chr8:100783200-100798200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr8:100783200-100841000	Weak transcription	Right Ventricle	heart
32	chr8:100783200-100858200	Weak transcription	Gastric	stomach
33	chr8:100783400-100857200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
34	chr8:100783600-100795400	Weak transcription	Stomach Mucosa	stomach
35	chr8:100783600-100798800	Weak transcription	Brain Inferior Temporal Lobe	brain
36	chr8:100784400-100801200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr8:100785200-100807400	Weak transcription	K562	blood
38	chr8:100787400-100798800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr8:100787600-100796400	Weak transcription	Fetal Intestine Large	intestine
40	chr8:100787600-100798400	Weak transcription	Hela-S3	cervix
41	chr8:100787600-100799000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr8:100787600-100801600	Weak transcription	Muscle Satellite Cultured Cells	--
43	chr8:100787600-100812200	Weak transcription	Fetal Thymus	thymus
44	chr8:100787800-100799200	Weak transcription	Sigmoid Colon	Sigmoid Colon
45	chr8:100787800-100803000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr8:100787800-100804000	Weak transcription	Fetal Intestine Small	intestine
47	chr8:100787800-100831600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr8:100788000-100804600	Weak transcription	Placenta	Placenta
49	chr8:100789400-100798000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
50	chr8:100789600-100803800	Weak transcription	GM12878-XiMat	blood

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