The 2.0 version of rSNPBase

Variant report

Variant rs61279215
Chromosome Location chr10:27331250-27331251
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27283200-27388400 Weak transcription Psoas Muscle Psoas
2 chr10:27287000-27350600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr10:27287800-27350600 Weak transcription Aorta Aorta
4 chr10:27288800-27357000 Weak transcription Gastric stomach
5 chr10:27289200-27361200 Weak transcription Brain Cingulate Gyrus brain
6 chr10:27289600-27360800 Weak transcription Hela-S3 cervix
7 chr10:27289800-27360800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr10:27290200-27351400 Weak transcription Thymus Thymus
9 chr10:27290200-27361400 Weak transcription Placenta Placenta
10 chr10:27291400-27360600 Weak transcription Lung lung
11 chr10:27291600-27351000 Weak transcription NHLF lung
12 chr10:27291600-27388000 Weak transcription Small Intestine intestine
13 chr10:27292000-27362200 Weak transcription Fetal Brain Male brain
14 chr10:27292200-27334800 Weak transcription Colon Smooth Muscle Colon
15 chr10:27293600-27340200 Weak transcription A549 lung
16 chr10:27295600-27345800 Weak transcription Brain Angular Gyrus brain
17 chr10:27303600-27361000 Weak transcription Rectal Smooth Muscle rectum
18 chr10:27306000-27360800 Weak transcription Esophagus oesophagus
19 chr10:27309400-27334800 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr10:27310200-27332000 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr10:27310400-27332200 Weak transcription Fetal Heart heart
22 chr10:27312800-27335200 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr10:27312800-27358200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr10:27313200-27363400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr10:27313200-27388200 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr10:27313200-27388600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr10:27313400-27388400 Weak transcription Placenta Amnion Placenta Amnion
28 chr10:27314600-27388800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr10:27317400-27351800 Weak transcription H1 Cell Line embryonic stem cell
30 chr10:27318200-27357400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr10:27318400-27350600 Weak transcription Primary B cells from peripheral blood blood
32 chr10:27319000-27351200 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr10:27319000-27360400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr10:27319600-27340800 Weak transcription GM12878-XiMat blood
35 chr10:27319600-27347800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr10:27320600-27332200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr10:27320600-27332600 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr10:27320600-27340600 Weak transcription Fetal Brain Female brain
39 chr10:27321800-27332800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr10:27323400-27388600 Weak transcription H9 Cell Line embryonic stem cell
41 chr10:27323600-27361800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr10:27323800-27332600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr10:27324200-27337000 Weak transcription HMEC breast
44 chr10:27324200-27352600 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr10:27324400-27339800 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr10:27324600-27332200 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr10:27324800-27331600 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr10:27324800-27350600 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr10:27325000-27333000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr10:27325400-27333400 Strong transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015