The 2.0 version of rSNPBase

Variant report

Variant rs61299058
Chromosome Location chr3:135828403-135828404
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:135790200-135830800 Weak transcription Psoas Muscle Psoas
2 chr3:135803400-135848000 Weak transcription Placenta Amnion Placenta Amnion
3 chr3:135803600-135860600 Weak transcription Esophagus oesophagus
4 chr3:135803800-135832400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:135803800-135860000 Weak transcription NHLF lung
6 chr3:135804000-135832000 Weak transcription H1 Cell Line embryonic stem cell
7 chr3:135804000-135833200 Weak transcription HMEC breast
8 chr3:135805200-135832000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr3:135805200-135832800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr3:135805400-135843800 Weak transcription NHEK skin
11 chr3:135807400-135833200 Weak transcription Lung lung
12 chr3:135810000-135828800 Weak transcription Muscle Satellite Cultured Cells --
13 chr3:135810200-135832800 Weak transcription Brain Angular Gyrus brain
14 chr3:135810200-135835600 Weak transcription Brain Cingulate Gyrus brain
15 chr3:135810200-135835800 Weak transcription Brain Inferior Temporal Lobe brain
16 chr3:135810400-135828800 Weak transcription Brain Substantia Nigra brain
17 chr3:135810400-135830800 Weak transcription Fetal Brain Male brain
18 chr3:135810400-135831200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:135810400-135832000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr3:135810400-135832000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr3:135810400-135832800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr3:135810400-135842200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr3:135810400-135843000 Weak transcription Gastric stomach
24 chr3:135810400-135848000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr3:135810400-135855400 Weak transcription Osteobl bone
26 chr3:135810400-135859800 Weak transcription NHDF-Ad bronchial
27 chr3:135810400-135861000 Weak transcription Rectal Smooth Muscle rectum
28 chr3:135818400-135832000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr3:135820200-135834400 Strong transcription Skeletal Muscle Female skeletal muscle
30 chr3:135821200-135830600 Weak transcription Fetal Heart heart
31 chr3:135822000-135861000 Weak transcription Ovary ovary
32 chr3:135822400-135831000 Weak transcription Fetal Kidney kidney
33 chr3:135822400-135832800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr3:135822600-135831000 Weak transcription Brain Germinal Matrix brain
35 chr3:135822600-135832000 Weak transcription Right Ventricle heart
36 chr3:135822800-135830800 Weak transcription Fetal Brain Female brain
37 chr3:135822800-135831800 Weak transcription Fetal Intestine Large intestine
38 chr3:135822800-135832000 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr3:135822800-135870000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr3:135823000-135829200 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr3:135823000-135830600 Weak transcription Stomach Smooth Muscle stomach
42 chr3:135823000-135831000 Weak transcription NH-A brain
43 chr3:135823000-135831400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr3:135823000-135832000 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr3:135823000-135832600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr3:135823200-135868400 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr3:135823800-135830800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr3:135824000-135829000 Weak transcription Brain Anterior Caudate brain
49 chr3:135824000-135829000 Weak transcription Brain Hippocampus Middle brain
50 chr3:135824200-135828800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015