Variant report

Variant	rs61307981
Chromosome Location	chr15:49376502-49376503
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000156958	Chromatin interaction
ENSG00000255302	Chromatin interaction
ENSG00000235883	Chromatin interaction
ENSG00000264210	Chromatin interaction
ENSG00000185634	Chromatin interaction

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs16962040	1.00[AMR][1000 genomes]
rs16962045	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16962046	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59905446	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61578756	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61615150	1.00[AMR][1000 genomes]
rs73406139	1.00[AMR][1000 genomes]
rs73406150	1.00[AMR][1000 genomes]
rs73406154	1.00[AMR][1000 genomes]
rs73406155	1.00[AMR][1000 genomes]
rs73406161	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73406169	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73406171	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73406174	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73406176	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73406183	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73406184	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73406186	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:49369200-49377800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr15:49372200-49381000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr15:49374600-49376600	Enhancers	NHLF	lung
4	chr15:49375000-49376800	Enhancers	Placenta	Placenta
5	chr15:49375800-49377200	Enhancers	Brain Inferior Temporal Lobe	brain
6	chr15:49375800-49377800	Enhancers	Brain Substantia Nigra	brain
7	chr15:49375800-49378800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr15:49376000-49377600	Weak transcription	Brain Angular Gyrus	brain
9	chr15:49376200-49376600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr15:49376200-49377400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr15:49376200-49378000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr15:49376200-49395200	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr15:49376400-49377200	Weak transcription	Brain Cingulate Gyrus	brain
14	chr15:49376400-49377200	Weak transcription	Brain Hippocampus Middle	brain
15	chr15:49376400-49377400	Enhancers	NHDF-Ad	bronchial
16	chr15:49376400-49378000	Weak transcription	Fetal Lung	lung
17	chr15:49376400-49397800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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