Variant report

Variant	rs61340036
Chromosome Location	chr8:8718408-8718409
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOS	chr8:8718072-8718669	HUVEC	blood vessel:	n/a	chr8:8718249-8718260 chr8:8718249-8718260 chr8:8718251-8718259 chr8:8718247-8718258 chr8:8718252-8718259 chr8:8718168-8718179 chr8:8718250-8718260 chr8:8718251-8718259
2	NFIC	chr8:8717863-8718626	GM12878	blood:	n/a	n/a
3	MYC	chr8:8718086-8718632	MCF10A-Er-Src	breast:	n/a	chr8:8718250-8718259
4	FOS	chr8:8718113-8718429	MCF10A-Er-Src	breast:	n/a	chr8:8718249-8718260 chr8:8718249-8718260 chr8:8718251-8718259 chr8:8718247-8718258 chr8:8718252-8718259 chr8:8718168-8718179 chr8:8718250-8718260 chr8:8718251-8718259
5	FOS	chr8:8718084-8718433	MCF10A-Er-Src	breast:	n/a	chr8:8718249-8718260 chr8:8718249-8718260 chr8:8718251-8718259 chr8:8718247-8718258 chr8:8718252-8718259 chr8:8718168-8718179 chr8:8718250-8718260 chr8:8718251-8718259
6	FOS	chr8:8718070-8718460	MCF10A-Er-Src	breast:	n/a	chr8:8718249-8718260 chr8:8718249-8718260 chr8:8718251-8718259 chr8:8718247-8718258 chr8:8718252-8718259 chr8:8718168-8718179 chr8:8718250-8718260 chr8:8718251-8718259
7	RUNX3	chr8:8718159-8718587	GM12878	blood:	n/a	n/a
8	CEBPB	chr8:8718401-8718601	A549	lung:	n/a	n/a
9	NFIC	chr8:8717895-8718566	SK-N-SH	brain:	n/a	n/a
10	PBX3	chr8:8717900-8718495	SK-N-SH	brain:	n/a	n/a
11	CEBPB	chr8:8718065-8718613	IMR90	lung:	n/a	n/a
12	FOS	chr8:8718109-8718418	MCF10A-Er-Src	breast:	n/a	chr8:8718249-8718260 chr8:8718249-8718260 chr8:8718251-8718259 chr8:8718247-8718258 chr8:8718252-8718259 chr8:8718168-8718179 chr8:8718250-8718260 chr8:8718251-8718259
13	PBX3	chr8:8717892-8718499	SK-N-SH	brain:	n/a	n/a
14	FOSL2	chr8:8717984-8718529	SK-N-SH	brain:	n/a	chr8:8718249-8718260 chr8:8718251-8718259 chr8:8718247-8718258 chr8:8718252-8718259 chr8:8718168-8718179 chr8:8718250-8718260 chr8:8718251-8718259

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:8718079..8719809-chr8:8729867..8732663,2	K562	blood:

Variant related genes	Relation type
MFHAS1	TF binding region

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890331	chr8:8093240-8971100	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv1019606	chr8:8353661-8736992	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	nsv539456	chr8:8353661-8736992	Strong transcription Weak transcription Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
4	nsv995047	chr8:8353662-8857913	Bivalent/Poised TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
5	nsv1022511	chr8:8493992-8737132	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
6	nsv539457	chr8:8493992-8737132	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
7	nsv831228	chr8:8608387-8790790	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
8	nsv1018828	chr8:8609880-8790660	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
9	nsv1022331	chr8:8610035-8787981	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
10	nsv917117	chr8:8621658-9313799	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
11	nsv1015437	chr8:8681255-8723798	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv1023221	chr8:8695393-8722418	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	nsv1024055	chr8:8697249-8721016	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	nsv539459	chr8:8697249-8721016	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	esv2757257	chr8:8707639-8747894	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
16	esv2759591	chr8:8707639-8747894	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
17	nsv818595	chr8:8712895-8752684	Enhancers Active TSS Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
18	nsv972581	chr8:8718314-8725009	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:8699400-8729600	Weak transcription	Fetal Stomach	stomach
2	chr8:8702200-8726000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr8:8702200-8726400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr8:8703000-8725200	Weak transcription	Hela-S3	cervix
5	chr8:8705000-8723600	Weak transcription	Fetal Muscle Leg	muscle
6	chr8:8707200-8726600	Weak transcription	Pancreas	Pancrea
7	chr8:8707400-8721600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr8:8708600-8726000	Weak transcription	Fetal Intestine Small	intestine
9	chr8:8709000-8726000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr8:8709200-8723000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr8:8709400-8729400	Weak transcription	NHLF	lung
12	chr8:8709600-8721400	Weak transcription	Primary B cells from cord blood	blood
13	chr8:8709600-8721400	Weak transcription	Primary T cells from cord blood	blood
14	chr8:8709600-8726000	Weak transcription	Fetal Intestine Large	intestine
15	chr8:8709600-8730000	Weak transcription	HSMMtube	muscle
16	chr8:8709800-8720200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr8:8709800-8721200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr8:8709800-8721400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr8:8712200-8719800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
20	chr8:8712600-8718600	Enhancers	Fetal Brain Male	brain
21	chr8:8713400-8720000	Enhancers	Primary T helper cells fromperipheralblood	blood
22	chr8:8714400-8721400	Weak transcription	Right Atrium	heart
23	chr8:8714400-8722400	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr8:8714400-8722400	Weak transcription	Stomach Smooth Muscle	stomach
25	chr8:8714400-8722600	Weak transcription	Gastric	stomach
26	chr8:8714400-8728000	Weak transcription	Ovary	ovary
27	chr8:8714400-8730000	Weak transcription	Aorta	Aorta
28	chr8:8714800-8721000	Weak transcription	Fetal Heart	heart
29	chr8:8714800-8726000	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr8:8714800-8728400	Weak transcription	Fetal Lung	lung
31	chr8:8714800-8730000	Weak transcription	Brain Angular Gyrus	brain
32	chr8:8715000-8722200	Weak transcription	Colon Smooth Muscle	Colon
33	chr8:8715600-8722400	Weak transcription	Rectal Smooth Muscle	rectum
34	chr8:8715600-8723000	Weak transcription	Duodenum Smooth Muscle	Duodenum
35	chr8:8715600-8723400	Weak transcription	Brain Cingulate Gyrus	brain
36	chr8:8715600-8726000	Weak transcription	Duodenum Mucosa	Duodenum
37	chr8:8715600-8726000	Weak transcription	Small Intestine	intestine
38	chr8:8715800-8721000	Weak transcription	HepG2	liver
39	chr8:8715800-8722000	Weak transcription	Liver	Liver
40	chr8:8715800-8723400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr8:8715800-8723400	Weak transcription	NHDF-Ad	bronchial
42	chr8:8715800-8725600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
43	chr8:8715800-8726200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr8:8716400-8718800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr8:8716400-8719400	Enhancers	Cortex derived primary cultured neurospheres	brain
46	chr8:8716400-8721200	Weak transcription	Fetal Thymus	thymus
47	chr8:8716400-8726800	Weak transcription	Spleen	Spleen
48	chr8:8716800-8718600	Enhancers	iPS-15b Cell Line	embryonic stem cell
49	chr8:8717000-8718600	Enhancers	HUES64 Cell Line	embryonic stem cell
50	chr8:8717000-8718600	Enhancers	Brain Anterior Caudate	brain

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