Variant report

Variant rs61347580
Chromosome Location chr15:78422584-78422585
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78396600-78423800 Weak transcription Placenta Amnion Placenta Amnion
2 chr15:78398400-78423200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr15:78406000-78423000 Weak transcription Stomach Smooth Muscle stomach
4 chr15:78406400-78423000 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr15:78409000-78423000 Weak transcription Brain Anterior Caudate brain
6 chr15:78413800-78422600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr15:78413800-78422600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr15:78415200-78423000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr15:78417200-78423200 Weak transcription Adipose Nuclei Adipose
10 chr15:78417400-78422800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr15:78417800-78423000 Weak transcription Fetal Stomach stomach
12 chr15:78420600-78423000 Weak transcription Stomach Mucosa stomach
13 chr15:78421000-78423000 Enhancers K562 blood
14 chr15:78421200-78422800 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr15:78421200-78422800 Enhancers H1 Cell Line embryonic stem cell
16 chr15:78421200-78422800 Enhancers HUES6 Cell Line embryonic stem cell
17 chr15:78421200-78422800 Weak transcription Brain Cingulate Gyrus brain
18 chr15:78421200-78423000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
19 chr15:78421200-78423000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr15:78421200-78423200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr15:78421200-78423200 Enhancers Skeletal Muscle Female skeletal muscle
22 chr15:78421200-78423400 Flanking Active TSS Fetal Thymus thymus
23 chr15:78421400-78422600 Enhancers Duodenum Mucosa Duodenum
24 chr15:78421400-78423000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr15:78421400-78423000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr15:78421400-78423200 Flanking Active TSS Fetal Intestine Large intestine
27 chr15:78421400-78423200 Enhancers Fetal Muscle Trunk muscle
28 chr15:78421400-78423200 Enhancers Fetal Muscle Leg muscle
29 chr15:78421400-78423400 Weak transcription Esophagus oesophagus
30 chr15:78421400-78423400 Flanking Active TSS Fetal Intestine Small intestine
31 chr15:78421600-78422800 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr15:78421600-78423000 Enhancers Cortex derived primary cultured neurospheres brain
33 chr15:78421600-78423200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr15:78421800-78422600 Weak transcription H9 Cell Line embryonic stem cell
35 chr15:78421800-78422800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr15:78421800-78423000 Enhancers Rectal Mucosa Donor 31 rectum
37 chr15:78421800-78423000 Weak transcription HMEC breast
38 chr15:78421800-78423200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr15:78421800-78423200 Enhancers Fetal Heart heart
40 chr15:78421800-78423400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr15:78421800-78423400 Enhancers Pancreas Pancrea
42 chr15:78422000-78423000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr15:78422000-78423200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr15:78422000-78423200 Enhancers Colonic Mucosa Colon
45 chr15:78422000-78423400 Weak transcription Left Ventricle heart
46 chr15:78422000-78423400 Weak transcription Psoas Muscle Psoas
47 chr15:78422000-78423600 Weak transcription Lung lung
48 chr15:78422000-78424000 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr15:78422200-78422800 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr15:78422200-78423000 Weak transcription Breast Myoepithelial Primary Cells Breast

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