Variant report

Variant	rs61377587
Chromosome Location	chr14:67932339-67932340
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:67928466..67932816-chr14:67938653..67942762,5	MCF-7	breast:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73286798	0.81[AFR][1000 genomes]
rs73288659	1.00[AMR][1000 genomes]
rs74056303	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045518	chr14:67529049-67959582	Strong transcription Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	nsv456331	chr14:67732861-68103780	Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
3	nsv564961	chr14:67732861-68103780	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
4	nsv470651	chr14:67732861-68113293	Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
5	nsv902066	chr14:67873128-68103780	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:67926200-67932800	Enhancers	Placenta	Placenta
2	chr14:67927600-67932600	Weak transcription	Fetal Brain Male	brain
3	chr14:67927800-67935400	Enhancers	Fetal Thymus	thymus
4	chr14:67928200-67935200	Enhancers	Thymus	Thymus
5	chr14:67928600-67934400	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr14:67928800-67932600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr14:67928800-67932600	Weak transcription	Duodenum Mucosa	Duodenum
8	chr14:67928800-67933800	Weak transcription	Fetal Intestine Large	intestine
9	chr14:67928800-67946600	Weak transcription	Pancreas	Pancrea
10	chr14:67929000-67934000	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr14:67929200-67933800	Weak transcription	Fetal Intestine Small	intestine
12	chr14:67929600-67942600	Weak transcription	Lung	lung
13	chr14:67929800-67938600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr14:67930200-67934000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr14:67930400-67932400	Enhancers	Primary T killer memory cells from peripheral blood	blood
16	chr14:67930400-67932600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
17	chr14:67930400-67932800	Enhancers	Primary T helper cells PMA-I stimulated	--
18	chr14:67930400-67935400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
19	chr14:67930600-67932400	Enhancers	Primary T cells fromperipheralblood	blood
20	chr14:67931000-67932600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
21	chr14:67931200-67939600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr14:67931400-67939000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr14:67931800-67932800	Enhancers	Primary T cells from cord blood	blood
24	chr14:67931800-67938600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr14:67932000-67934000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
26	chr14:67932000-67934200	Weak transcription	Primary T helper cells fromperipheralblood	blood
27	chr14:67932000-67939600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr14:67932200-67932600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr14:67932200-67932800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr14:67932200-67933800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
31	chr14:67932200-67934200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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