The 2.0 version of rSNPBase

Variant report

Variant rs61403209
Chromosome Location chr3:111724769-111724770
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111718400-111726400 Weak transcription Aorta Aorta
2 chr3:111718400-111730000 Weak transcription Gastric stomach
3 chr3:111718400-111732200 Weak transcription Lung lung
4 chr3:111718800-111726400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr3:111719000-111729800 Weak transcription Right Ventricle heart
6 chr3:111720000-111727800 Weak transcription H9 Cell Line embryonic stem cell
7 chr3:111720200-111752800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr3:111720600-111730600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr3:111720800-111729800 Weak transcription Brain Anterior Caudate brain
10 chr3:111720800-111732200 Weak transcription H1 Cell Line embryonic stem cell
11 chr3:111721800-111726600 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr3:111721800-111732200 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr3:111722000-111726600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr3:111722000-111732200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:111722200-111726600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr3:111722400-111726400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr3:111722600-111732600 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr3:111722800-111725000 Weak transcription Fetal Lung lung
19 chr3:111722800-111729800 Weak transcription Brain Inferior Temporal Lobe brain
20 chr3:111723000-111725000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr3:111723000-111732200 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr3:111723000-111732200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr3:111723200-111727800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr3:111723400-111726000 Weak transcription Brain Germinal Matrix brain
25 chr3:111723400-111730000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr3:111723600-111725200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr3:111723800-111726200 Weak transcription Fetal Brain Male brain
28 chr3:111724000-111725000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr3:111724000-111725000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr3:111724000-111726600 Weak transcription Liver Liver
31 chr3:111724000-111729200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr3:111724000-111732000 Weak transcription Fetal Intestine Small intestine
33 chr3:111724200-111725600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr3:111724200-111726200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:111724200-111728400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr3:111724400-111725800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr3:111724400-111726200 Weak transcription Osteobl bone
38 chr3:111724400-111726600 Weak transcription NHEK skin
39 chr3:111724400-111729400 Weak transcription Brain Angular Gyrus brain
40 chr3:111724400-111729800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr3:111724400-111732000 Weak transcription Fetal Intestine Large intestine
42 chr3:111724400-111734200 Weak transcription NH-A brain
43 chr3:111724600-111725000 Weak transcription Fetal Brain Female brain
44 chr3:111724600-111726200 Weak transcription HMEC breast
45 chr3:111724600-111726600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr3:111724600-111734400 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015