Variant report

Variant	rs61449201
Chromosome Location	chr7:147333691-147333692
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs17170624	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57004198	1.00[EUR][1000 genomes]
rs58554793	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59914873	1.00[EUR][1000 genomes]
rs60539635	1.00[EUR][1000 genomes]
rs6975479	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73470987	1.00[EUR][1000 genomes]
rs73470989	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73741886	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147333200-147338400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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