Variant report

Variant	rs61508277
Chromosome Location	chr14:65307824-65307825
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:65307162..65309690-chr14:65332529..65335458,2	K562	blood:
2	chr14:65302136..65304869-chr14:65306448..65308856,2	MCF-7	breast:
3	chr14:65306551..65309829-chr14:65344865..65347134,3	K562	blood:
4	chr14:65306058..65308869-chr14:65317790..65319964,2	MCF-7	breast:
5	chr14:65296488..65300322-chr14:65306337..65310294,4	K562	blood:
6	chr14:65306477..65308569-chr14:65377752..65379840,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000070182	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17102199	0.91[AFR][1000 genomes]
rs17102205	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17102210	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60607350	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3693408	chr14:65292670-65358576	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65296400-65308600	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr14:65298400-65309800	Weak transcription	Right Ventricle	heart
3	chr14:65303600-65308200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr14:65306600-65308000	Enhancers	Fetal Heart	heart
5	chr14:65306800-65308000	Enhancers	Psoas Muscle	Psoas
6	chr14:65307000-65309600	Enhancers	Fetal Muscle Leg	muscle
7	chr14:65307000-65314200	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr14:65307200-65308400	Enhancers	A549	lung
9	chr14:65307200-65309400	Flanking Active TSS	K562	blood
10	chr14:65307600-65309000	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr14:65307600-65309000	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr14:65307600-65309400	Weak transcription	Left Ventricle	heart
13	chr14:65307600-65310000	Weak transcription	Right Atrium	heart
14	chr14:65307800-65308000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
15	chr14:65307800-65308200	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr14:65307800-65308200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr14:65307800-65308400	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr14:65307800-65308400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr14:65307800-65308400	Enhancers	Placenta Amnion	Placenta Amnion
20	chr14:65307800-65308800	Enhancers	HUES64 Cell Line	embryonic stem cell
21	chr14:65307800-65308800	Enhancers	Aorta	Aorta
22	chr14:65307800-65308800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
23	chr14:65307800-65308800	Enhancers	Placenta	Placenta
24	chr14:65307800-65309000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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