Variant report

Variant	rs61564948
Chromosome Location	chr14:79342670-79342671
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs55744457	1.00[AMR][1000 genomes]
rs55909861	1.00[AMR][1000 genomes]
rs58501370	1.00[AMR][1000 genomes]
rs59271106	1.00[AMR][1000 genomes]
rs74064952	1.00[AMR][1000 genomes]
rs74064962	1.00[AMR][1000 genomes]
rs74064963	1.00[AMR][1000 genomes]
rs74064967	1.00[AMR][1000 genomes]
rs74064970	1.00[AMR][1000 genomes]
rs74067004	1.00[AMR][1000 genomes]
rs74067139	1.00[AMR][1000 genomes]
rs74067142	1.00[AMR][1000 genomes]
rs74067146	1.00[AMR][1000 genomes]
rs74067151	1.00[AMR][1000 genomes]
rs74067156	1.00[AMR][1000 genomes]
rs74069206	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832838	chr14:79306627-79445382	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv1048274	chr14:79323592-79417906	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79341000-79342800	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr14:79341400-79343000	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr14:79341600-79343200	Enhancers	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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