The 2.0 version of rSNPBase

Variant report

Variant rs61676179
Chromosome Location chr22:32176825-32176826
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32150800-32212800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:32151000-32210800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr22:32151200-32181000 Weak transcription NHDF-Ad bronchial
4 chr22:32151400-32217400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr22:32151600-32178200 Weak transcription Stomach Mucosa stomach
6 chr22:32152200-32184000 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr22:32152400-32187000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr22:32153000-32181600 Strong transcription Primary monocytes fromperipheralblood blood
9 chr22:32153400-32187000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr22:32153800-32183800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr22:32154000-32182000 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr22:32154000-32188600 Strong transcription Fetal Muscle Trunk muscle
13 chr22:32154200-32180600 Strong transcription Fetal Stomach stomach
14 chr22:32154200-32184000 Strong transcription Liver Liver
15 chr22:32154400-32188200 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr22:32156200-32182200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr22:32156400-32184000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr22:32159000-32177000 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr22:32159200-32179600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr22:32159400-32184200 Strong transcription Primary B cells from peripheral blood blood
21 chr22:32159600-32186600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr22:32159600-32207600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr22:32163200-32185400 Weak transcription Fetal Heart heart
24 chr22:32164000-32182200 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr22:32164600-32196000 Weak transcription Hela-S3 cervix
26 chr22:32165000-32197600 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr22:32165200-32179600 Strong transcription Thymus Thymus
28 chr22:32167800-32179800 Strong transcription Brain Hippocampus Middle brain
29 chr22:32167800-32179800 Strong transcription Sigmoid Colon Sigmoid Colon
30 chr22:32168000-32180000 Strong transcription Primary T cells from cord blood blood
31 chr22:32169400-32177000 Strong transcription Dnd41 blood
32 chr22:32169800-32177000 Strong transcription Gastric stomach
33 chr22:32170200-32179600 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr22:32171200-32195000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr22:32171200-32204200 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr22:32171400-32177000 Strong transcription Primary hematopoietic stem cells blood
37 chr22:32171600-32180000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
38 chr22:32171600-32183000 Strong transcription Duodenum Mucosa Duodenum
39 chr22:32171600-32184600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr22:32171600-32185000 Weak transcription K562 blood
41 chr22:32172000-32179600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr22:32172000-32186000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr22:32172200-32177000 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr22:32172200-32182200 Strong transcription Primary T helper naive cells fromperipheralblood blood
45 chr22:32172200-32182200 Strong transcription Primary T helper cells PMA-I stimulated --
46 chr22:32172200-32182800 Strong transcription Primary T cells fromperipheralblood blood
47 chr22:32172200-32254400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr22:32172400-32180000 Strong transcription Fetal Intestine Small intestine
49 chr22:32172800-32221000 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr22:32173000-32180200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015