The 2.0 version of rSNPBase

Variant report

Variant rs61729566
Chromosome Location chr3:141762799-141762800
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:141747600-141762800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr3:141747600-141773000 Weak transcription Duodenum Mucosa Duodenum
3 chr3:141747600-141780400 Weak transcription Left Ventricle heart
4 chr3:141751200-141765000 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr3:141751400-141764400 Weak transcription Primary hematopoietic stem cells blood
6 chr3:141753600-141768400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr3:141755200-141771400 Weak transcription Brain Inferior Temporal Lobe brain
8 chr3:141758400-141777400 Weak transcription Fetal Muscle Trunk muscle
9 chr3:141758800-141768800 Weak transcription Esophagus oesophagus
10 chr3:141758800-141775800 Weak transcription Ovary ovary
11 chr3:141760000-141770000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr3:141760400-141763600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:141760400-141773800 Weak transcription Stomach Smooth Muscle stomach
14 chr3:141760600-141763800 Weak transcription Right Ventricle heart
15 chr3:141760600-141764000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr3:141760600-141800800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr3:141760800-141772600 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr3:141760800-141774600 Weak transcription Liver Liver
19 chr3:141761000-141772600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr3:141761000-141773400 Weak transcription Dnd41 blood
21 chr3:141761000-141781600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr3:141761000-141807800 Weak transcription Fetal Lung lung
23 chr3:141761600-141772200 Weak transcription Adipose Nuclei Adipose
24 chr3:141761600-141775600 Weak transcription NHEK skin
25 chr3:141761800-141819600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr3:141762000-141772800 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr3:141762200-141763000 Strong transcription Thymus Thymus
28 chr3:141762400-141763000 ZNF genes & repeats Fetal Brain Female brain
29 chr3:141762400-141763000 Strong transcription Fetal Intestine Large intestine
30 chr3:141762400-141763000 ZNF genes & repeats Fetal Thymus thymus
31 chr3:141762400-141763400 ZNF genes & repeats Fetal Intestine Small intestine
32 chr3:141762600-141762800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr3:141762600-141762800 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr3:141762600-141762800 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr3:141762600-141763000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
36 chr3:141762600-141763000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
37 chr3:141762600-141763000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
38 chr3:141762600-141763000 ZNF genes & repeats Aorta Aorta
39 chr3:141762600-141763000 ZNF genes & repeats Brain Germinal Matrix brain
40 chr3:141762600-141763000 ZNF genes & repeats Fetal Muscle Leg muscle
41 chr3:141762600-141763000 ZNF genes & repeats Fetal Stomach stomach
42 chr3:141762600-141763000 ZNF genes & repeats Pancreas Pancrea
43 chr3:141762600-141763000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
44 chr3:141762600-141775800 Weak transcription Lung lung

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Last update: Aug 31, 2015