The 2.0 version of rSNPBase

Variant report

Variant rs61736520
Chromosome Location chr2:72958333-72958334
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72905800-72984400 Weak transcription Aorta Aorta
2 chr2:72922400-72972000 Weak transcription Right Ventricle heart
3 chr2:72922400-72976200 Weak transcription Psoas Muscle Psoas
4 chr2:72923000-72972800 Weak transcription Brain Inferior Temporal Lobe brain
5 chr2:72923000-73008600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:72937200-72974200 Weak transcription Brain Hippocampus Middle brain
7 chr2:72937800-72978400 Weak transcription Brain Germinal Matrix brain
8 chr2:72938200-72987800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:72940600-72959600 Weak transcription Stomach Smooth Muscle stomach
10 chr2:72941400-72970000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr2:72943600-72978800 Weak transcription Primary T cells from cord blood blood
12 chr2:72945400-72968000 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr2:72945600-72977800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:72946400-72961200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr2:72946400-72974600 Weak transcription Brain Substantia Nigra brain
16 chr2:72946600-72969800 Weak transcription Placenta Placenta
17 chr2:72946600-72972800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr2:72946800-72960800 Weak transcription Lung lung
19 chr2:72946800-72971000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr2:72946800-72980200 Weak transcription Left Ventricle heart
21 chr2:72948400-72968400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr2:72950000-72982400 Weak transcription Colon Smooth Muscle Colon
23 chr2:72950200-72959800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:72950400-72970400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr2:72950400-72970800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr2:72950400-72970800 Weak transcription NHEK skin
27 chr2:72950400-72972600 Weak transcription Brain Angular Gyrus brain
28 chr2:72951000-72970800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr2:72951200-72965200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr2:72951200-72974600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr2:72951400-72971400 Weak transcription Fetal Stomach stomach
32 chr2:72951600-72968600 Weak transcription Small Intestine intestine
33 chr2:72951600-72971200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr2:72951600-72972600 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr2:72951800-72965200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr2:72951800-72967600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:72952200-72972800 Weak transcription Duodenum Mucosa Duodenum
38 chr2:72952400-72970800 Weak transcription Fetal Intestine Large intestine
39 chr2:72952800-72975000 Weak transcription Ovary ovary
40 chr2:72953600-72970200 Weak transcription HepG2 liver
41 chr2:72956000-72972800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr2:72957800-72967600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr2:72958200-72958400 Enhancers Fetal Heart heart
44 chr2:72958200-72958600 Enhancers Brain Anterior Caudate brain
45 chr2:72958200-72958600 Enhancers Brain Cingulate Gyrus brain
46 chr2:72958200-72958800 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015