The 2.0 version of rSNPBase

Variant report

Variant rs61740391
Chromosome Location chr1:179805154-179805155
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179791000-179807200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:179793800-179808800 Weak transcription Monocytes-CD14+_RO01746 blood
3 chr1:179794800-179809200 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr1:179795200-179812400 Weak transcription Left Ventricle heart
5 chr1:179795200-179815200 Weak transcription Ovary ovary
6 chr1:179795400-179807600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:179795400-179815200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:179795600-179834200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:179797400-179805800 Weak transcription Primary monocytes fromperipheralblood blood
10 chr1:179797600-179810000 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr1:179798400-179805800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:179799600-179815200 Weak transcription Brain Angular Gyrus brain
13 chr1:179800400-179808800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:179800400-179809000 Weak transcription Stomach Smooth Muscle stomach
15 chr1:179800400-179815200 Weak transcription Psoas Muscle Psoas
16 chr1:179800600-179815200 Weak transcription Esophagus oesophagus
17 chr1:179800800-179808800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:179800800-179815200 Weak transcription Hela-S3 cervix
19 chr1:179801000-179814400 Weak transcription HMEC breast
20 chr1:179801000-179815000 Weak transcription K562 blood
21 chr1:179801200-179808800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:179801200-179809400 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:179801200-179810400 Weak transcription HSMMtube muscle
24 chr1:179801200-179815200 Weak transcription Lung lung
25 chr1:179801200-179815200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:179801200-179815200 Weak transcription Spleen Spleen
27 chr1:179801400-179808000 Weak transcription Pancreas Pancrea
28 chr1:179801400-179810200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:179801400-179810600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:179801400-179810600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr1:179801600-179813200 Weak transcription GM12878-XiMat blood
32 chr1:179801800-179807200 Weak transcription Osteobl bone
33 chr1:179801800-179808600 Weak transcription Liver Liver
34 chr1:179801800-179808600 Weak transcription HSMM muscle
35 chr1:179801800-179808800 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:179801800-179813200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr1:179801800-179815200 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr1:179801800-179815200 Weak transcription NHDF-Ad bronchial
39 chr1:179802200-179815200 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:179802400-179808600 Weak transcription Primary T cells from cord blood blood
41 chr1:179802400-179808600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:179802400-179808800 Weak transcription Fetal Brain Female brain
43 chr1:179802400-179813400 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr1:179802400-179815000 Weak transcription H1 Cell Line embryonic stem cell
45 chr1:179802400-179815200 Weak transcription Thymus Thymus
46 chr1:179802400-179836200 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr1:179802600-179808800 Weak transcription Primary T cells fromperipheralblood blood
48 chr1:179802600-179808800 Weak transcription Duodenum Mucosa Duodenum
49 chr1:179802600-179810800 Weak transcription Fetal Thymus thymus
50 chr1:179802600-179814200 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015