The 2.0 version of rSNPBase

Variant report

Variant rs61748216
Chromosome Location chr5:40843524-40843525
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:40836000-40843600 Weak transcription Spleen Spleen
2 chr5:40836000-40852600 Weak transcription Small Intestine intestine
3 chr5:40841200-40843600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr5:40841200-40844000 Active TSS Right Atrium heart
5 chr5:40841400-40852000 Weak transcription Pancreas Pancrea
6 chr5:40841800-40843800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr5:40841800-40845000 Weak transcription Lung lung
8 chr5:40841800-40852400 Weak transcription Esophagus oesophagus
9 chr5:40842200-40852200 Weak transcription Left Ventricle heart
10 chr5:40842200-40852600 Weak transcription Placenta Placenta
11 chr5:40842200-40853800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr5:40842400-40843800 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr5:40842400-40852000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr5:40842400-40852400 Weak transcription Liver Liver
15 chr5:40842400-40852400 Weak transcription Ovary ovary
16 chr5:40842400-40852600 Weak transcription Primary T cells from cord blood blood
17 chr5:40842400-40853400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr5:40842400-40853800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr5:40842400-40854200 Weak transcription Fetal Stomach stomach
20 chr5:40842400-40854600 Weak transcription Brain Hippocampus Middle brain
21 chr5:40842600-40844800 Enhancers Primary monocytes fromperipheralblood blood
22 chr5:40842600-40847600 Weak transcription HMEC breast
23 chr5:40842800-40843600 Weak transcription Primary hematopoietic stem cells blood
24 chr5:40842800-40843800 Flanking Active TSS Adipose Nuclei Adipose
25 chr5:40842800-40844000 Enhancers K562 blood
26 chr5:40842800-40846200 Weak transcription A549 lung
27 chr5:40842800-40846800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr5:40842800-40849000 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr5:40842800-40849200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr5:40842800-40852000 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr5:40842800-40853200 Weak transcription Fetal Intestine Small intestine
32 chr5:40842800-40854000 Weak transcription Aorta Aorta
33 chr5:40842800-40856000 Weak transcription Right Ventricle heart
34 chr5:40843000-40843600 Enhancers Colon Smooth Muscle Colon
35 chr5:40843000-40843600 Enhancers Osteobl bone
36 chr5:40843000-40846000 Weak transcription NHLF lung
37 chr5:40843000-40849000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr5:40843200-40843600 Flanking Active TSS Hela-S3 cervix
39 chr5:40843200-40852200 Weak transcription Duodenum Mucosa Duodenum
40 chr5:40843400-40843800 Enhancers Primary neutrophils fromperipheralblood blood
41 chr5:40843400-40843800 Enhancers Psoas Muscle Psoas
42 chr5:40843400-40843800 Enhancers Stomach Mucosa stomach
43 chr5:40843400-40844000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr5:40843400-40844000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr5:40843400-40844200 Enhancers HUVEC blood vessel
46 chr5:40843400-40848800 Weak transcription Primary B cells from cord blood blood
47 chr5:40843400-40851800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr5:40843400-40852400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015