The 2.0 version of rSNPBase

Variant report

Variant rs61750352
Chromosome Location chr13:50307126-50307127
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50266200-50307800 Weak transcription Gastric stomach
2 chr13:50266200-50316000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr13:50266400-50349000 Weak transcription Esophagus oesophagus
4 chr13:50273200-50326000 Weak transcription Aorta Aorta
5 chr13:50273200-50333800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr13:50276000-50307600 Weak transcription Pancreas Pancrea
7 chr13:50277000-50318400 Weak transcription Hela-S3 cervix
8 chr13:50280000-50308000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr13:50290000-50324000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr13:50290000-50334000 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr13:50290200-50316800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr13:50290400-50307200 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr13:50293200-50326000 Weak transcription Fetal Brain Male brain
14 chr13:50294200-50315000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr13:50294200-50324000 Weak transcription Rectal Smooth Muscle rectum
16 chr13:50294400-50333000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr13:50294800-50314200 Weak transcription Stomach Mucosa stomach
18 chr13:50296200-50307600 Weak transcription Placenta Amnion Placenta Amnion
19 chr13:50296200-50330400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr13:50296400-50307200 Weak transcription Psoas Muscle Psoas
21 chr13:50296400-50307600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr13:50296400-50320200 Weak transcription Spleen Spleen
23 chr13:50296600-50307800 Weak transcription Brain Substantia Nigra brain
24 chr13:50296600-50307800 Weak transcription Lung lung
25 chr13:50296600-50309000 Weak transcription Brain Angular Gyrus brain
26 chr13:50296600-50330400 Weak transcription Small Intestine intestine
27 chr13:50296600-50338600 Weak transcription Ovary ovary
28 chr13:50296800-50315000 Weak transcription HMEC breast
29 chr13:50297000-50322400 Weak transcription Brain Cingulate Gyrus brain
30 chr13:50298000-50327600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr13:50298200-50307200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr13:50299000-50314400 Weak transcription Fetal Brain Female brain
33 chr13:50299200-50307800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr13:50299200-50327600 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr13:50299400-50307800 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr13:50299400-50319400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr13:50300600-50345600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr13:50300800-50307800 Weak transcription Fetal Kidney kidney
39 chr13:50300800-50321800 Weak transcription Brain Anterior Caudate brain
40 chr13:50301000-50319200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr13:50301200-50307400 Weak transcription Left Ventricle heart
42 chr13:50301200-50308400 Weak transcription H9 Cell Line embryonic stem cell
43 chr13:50301200-50316000 Weak transcription Primary B cells from peripheral blood blood
44 chr13:50301200-50323600 Weak transcription Colon Smooth Muscle Colon
45 chr13:50301200-50327800 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr13:50301400-50307800 Weak transcription Brain Inferior Temporal Lobe brain
47 chr13:50301400-50313600 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr13:50301800-50308000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr13:50302000-50307600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr13:50302200-50307800 Strong transcription Dnd41 blood

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Last update: Aug 31, 2015