Variant report

Variant	rs61796580
Chromosome Location	chr3:178621534-178621535
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs58731935	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61796579	1.00[ASN][1000 genomes]
rs61796583	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61796585	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61796625	1.00[ASN][1000 genomes]
rs61796654	1.00[ASN][1000 genomes]
rs61798160	1.00[ASN][1000 genomes]
rs6789658	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6804849	1.00[ASN][1000 genomes]
rs7372297	1.00[ASN][1000 genomes]
rs9290673	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9854435	1.00[ASN][1000 genomes]
rs9872496	1.00[ASN][1000 genomes]
rs9882284	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:178618800-178628000	Weak transcription	Brain Hippocampus Middle	brain
2	chr3:178621000-178623400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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