Variant report

Variant	rs61796579
Chromosome Location	chr3:178618058-178618059
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12495431	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4395443	0.83[AFR][1000 genomes]
rs58731935	1.00[ASN][1000 genomes]
rs61796580	1.00[ASN][1000 genomes]
rs61796583	1.00[ASN][1000 genomes]
rs61796585	1.00[ASN][1000 genomes]
rs61796625	0.91[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61796654	1.00[ASN][1000 genomes]
rs61798160	1.00[ASN][1000 genomes]
rs6789658	1.00[ASN][1000 genomes]
rs6804849	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7372297	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9854435	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9872496	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9882284	1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:178617600-178620400	Enhancers	Brain Germinal Matrix	brain
2	chr3:178617800-178618200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr3:178617800-178618600	Enhancers	Pancreatic Islets	Pancreatic Islet
4	chr3:178617800-178618600	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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