The 2.0 version of rSNPBase

Variant report

Variant rs61820166
Chromosome Location chr1:150556036-150556037
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150553000-150557000 Weak transcription Fetal Stomach stomach
2 chr1:150553000-150557200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr1:150553000-150559200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:150553000-150560600 Weak transcription Right Atrium heart
5 chr1:150553000-150562600 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:150553000-150572800 Weak transcription Thymus Thymus
7 chr1:150553000-150583200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:150553200-150558200 Weak transcription Right Ventricle heart
9 chr1:150553200-150564200 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:150553200-150566000 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr1:150553200-150568400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:150553200-150569400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:150553200-150569400 Weak transcription Fetal Thymus thymus
14 chr1:150553200-150572600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:150553200-150572600 Weak transcription Fetal Brain Female brain
16 chr1:150553200-150572800 Weak transcription Brain Angular Gyrus brain
17 chr1:150553200-150577600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:150553200-150581800 Weak transcription Stomach Smooth Muscle stomach
19 chr1:150553200-150581800 Weak transcription Dnd41 blood
20 chr1:150553200-150583200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:150553200-150592000 Weak transcription Fetal Kidney kidney
22 chr1:150553400-150556400 Weak transcription Fetal Intestine Small intestine
23 chr1:150553800-150568000 Weak transcription HSMM muscle
24 chr1:150553800-150572600 Weak transcription Lung lung
25 chr1:150553800-150576800 Weak transcription Colon Smooth Muscle Colon
26 chr1:150554000-150558400 Weak transcription Duodenum Mucosa Duodenum
27 chr1:150554000-150560400 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:150554000-150568400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:150554000-150568600 Weak transcription Hela-S3 cervix
30 chr1:150554000-150572000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:150554000-150583200 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr1:150554200-150568400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr1:150554400-150572600 Weak transcription Primary T cells fromperipheralblood blood
34 chr1:150555400-150568400 Weak transcription Osteobl bone
35 chr1:150555400-150572600 Weak transcription Primary B cells from peripheral blood blood
36 chr1:150555400-150582600 Weak transcription Primary B cells from cord blood blood
37 chr1:150555600-150568400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:150555600-150568400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:150556000-150564800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015