The 2.0 version of rSNPBase

Variant report

Variant rs61820170
Chromosome Location chr1:150566861-150566862
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150553000-150572800 Weak transcription Thymus Thymus
2 chr1:150553000-150583200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:150553200-150568400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:150553200-150569400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:150553200-150569400 Weak transcription Fetal Thymus thymus
6 chr1:150553200-150572600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:150553200-150572600 Weak transcription Fetal Brain Female brain
8 chr1:150553200-150572800 Weak transcription Brain Angular Gyrus brain
9 chr1:150553200-150577600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:150553200-150581800 Weak transcription Stomach Smooth Muscle stomach
11 chr1:150553200-150581800 Weak transcription Dnd41 blood
12 chr1:150553200-150583200 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:150553200-150592000 Weak transcription Fetal Kidney kidney
14 chr1:150553800-150568000 Weak transcription HSMM muscle
15 chr1:150553800-150572600 Weak transcription Lung lung
16 chr1:150553800-150576800 Weak transcription Colon Smooth Muscle Colon
17 chr1:150554000-150568400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:150554000-150568600 Weak transcription Hela-S3 cervix
19 chr1:150554000-150572000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:150554000-150583200 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr1:150554200-150568400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr1:150554400-150572600 Weak transcription Primary T cells fromperipheralblood blood
23 chr1:150555400-150568400 Weak transcription Osteobl bone
24 chr1:150555400-150572600 Weak transcription Primary B cells from peripheral blood blood
25 chr1:150555400-150582600 Weak transcription Primary B cells from cord blood blood
26 chr1:150555600-150568400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:150555600-150568400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:150557200-150568400 Weak transcription Fetal Intestine Small intestine
29 chr1:150558800-150568400 Weak transcription Duodenum Mucosa Duodenum
30 chr1:150560200-150576000 Weak transcription Ovary ovary
31 chr1:150561200-150572400 Weak transcription Fetal Muscle Leg muscle
32 chr1:150561400-150577000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:150561800-150581800 Weak transcription Brain Substantia Nigra brain
34 chr1:150562200-150583200 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr1:150563000-150572400 Weak transcription Brain Hippocampus Middle brain
36 chr1:150563000-150583800 Weak transcription Fetal Lung lung
37 chr1:150564000-150576200 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr1:150564400-150583800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr1:150564800-150569200 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr1:150565000-150572600 Weak transcription Brain Germinal Matrix brain
41 chr1:150565400-150572000 Weak transcription Fetal Muscle Trunk muscle
42 chr1:150565400-150572600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr1:150565600-150567600 Weak transcription Primary monocytes fromperipheralblood blood
44 chr1:150565600-150567600 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr1:150565600-150572600 Weak transcription Placenta Placenta
46 chr1:150565800-150569400 Weak transcription Stomach Mucosa stomach
47 chr1:150566000-150567400 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr1:150566000-150568600 Weak transcription Small Intestine intestine
49 chr1:150566200-150571800 Weak transcription Fetal Stomach stomach
50 chr1:150566200-150572000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015