The 2.0 version of rSNPBase

Variant report

Variant rs11204689
Chromosome Location chr1:150642159-150642160
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150603200-150661200 Weak transcription Brain Substantia Nigra brain
2 chr1:150603400-150668200 Weak transcription Brain Germinal Matrix brain
3 chr1:150608600-150668600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:150618800-150660400 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:150621000-150660800 Weak transcription Colon Smooth Muscle Colon
6 chr1:150621200-150660400 Weak transcription Brain Inferior Temporal Lobe brain
7 chr1:150621200-150664800 Weak transcription Fetal Brain Female brain
8 chr1:150621200-150665000 Weak transcription Fetal Kidney kidney
9 chr1:150621200-150669400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:150621400-150644200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:150621400-150660400 Weak transcription HSMM muscle
12 chr1:150621800-150661200 Weak transcription NHDF-Ad bronchial
13 chr1:150621800-150668600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:150622000-150661400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:150622000-150668600 Weak transcription HSMMtube muscle
16 chr1:150622000-150669400 Weak transcription Esophagus oesophagus
17 chr1:150622200-150660600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:150623200-150642200 Weak transcription Right Ventricle heart
19 chr1:150623200-150648400 Weak transcription Lung lung
20 chr1:150623200-150668600 Weak transcription Brain Angular Gyrus brain
21 chr1:150623400-150663000 Weak transcription Rectal Smooth Muscle rectum
22 chr1:150630000-150664800 Weak transcription Thymus Thymus
23 chr1:150630800-150656200 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr1:150631400-150645000 Weak transcription Primary hematopoietic stem cells blood
25 chr1:150631800-150665400 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr1:150632400-150669000 Weak transcription Aorta Aorta
27 chr1:150632600-150647000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:150632600-150654200 Weak transcription Ovary ovary
29 chr1:150632600-150658400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:150632600-150665000 Weak transcription Colonic Mucosa Colon
31 chr1:150632600-150668200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:150633000-150668600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr1:150633200-150656400 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr1:150633200-150656400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr1:150633200-150669200 Weak transcription Left Ventricle heart
36 chr1:150633400-150656400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr1:150633400-150660600 Weak transcription Fetal Lung lung
38 chr1:150633400-150665000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:150634200-150653600 Weak transcription Osteobl bone
40 chr1:150634200-150654400 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr1:150634400-150648200 Weak transcription NHLF lung
42 chr1:150634400-150653000 Weak transcription Fetal Muscle Trunk muscle
43 chr1:150634400-150654000 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:150634400-150656400 Weak transcription Primary B cells from cord blood blood
45 chr1:150634600-150651600 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:150634600-150656200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr1:150634600-150656400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr1:150634600-150656400 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr1:150634600-150658800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:150634600-150660400 Weak transcription K562 blood

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Last update: Aug 31, 2015