Variant report

Variant	rs61907585
Chromosome Location	chr11:94035441-94035442
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7106476	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv523083	chr11:93962121-94150790	Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv832233	chr11:93981434-94158471	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs61907585	RP11-680H20.2	cis	Artery Tibial	GTEx

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94029800-94038000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr11:94030600-94036800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr11:94031200-94038800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr11:94034400-94035600	Weak transcription	Fetal Muscle Trunk	muscle
5	chr11:94034400-94035800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr11:94034600-94035600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr11:94035400-94035800	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr11:94035400-94035800	Enhancers	Brain Germinal Matrix	brain
9	chr11:94035400-94036000	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr11:94035400-94037600	Enhancers	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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