The 2.0 version of rSNPBase

Variant report

Variant rs61914512
Chromosome Location chr12:26426996-26426997
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:26421000-26429000 Enhancers Fetal Intestine Small intestine
2 chr12:26421800-26435800 Weak transcription Gastric stomach
3 chr12:26422600-26427000 Weak transcription Small Intestine intestine
4 chr12:26422600-26429200 Enhancers Skeletal Muscle Female skeletal muscle
5 chr12:26423200-26427200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr12:26423800-26427400 Enhancers NHEK skin
7 chr12:26423800-26429000 Enhancers HMEC breast
8 chr12:26423800-26429200 Enhancers Stomach Mucosa stomach
9 chr12:26424000-26427400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr12:26424000-26429000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr12:26424000-26429200 Enhancers Fetal Intestine Large intestine
12 chr12:26424000-26431800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr12:26424200-26429000 Enhancers Fetal Muscle Leg muscle
14 chr12:26424400-26428400 Enhancers Right Atrium heart
15 chr12:26424400-26430000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr12:26424600-26427200 Enhancers Brain Hippocampus Middle brain
17 chr12:26424600-26427400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr12:26424600-26429000 Enhancers Brain Substantia Nigra brain
19 chr12:26424600-26429000 Enhancers Duodenum Mucosa Duodenum
20 chr12:26424600-26429000 Enhancers Placenta Placenta
21 chr12:26424600-26429000 Enhancers Fetal Thymus thymus
22 chr12:26424600-26429200 Enhancers Brain Anterior Caudate brain
23 chr12:26424600-26431800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr12:26424600-26433400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr12:26424800-26427400 Enhancers HepG2 liver
26 chr12:26424800-26447000 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr12:26425000-26427000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr12:26425000-26427000 Enhancers GM12878-XiMat blood
29 chr12:26425000-26427000 Enhancers Hela-S3 cervix
30 chr12:26425000-26427200 Weak transcription Fetal Lung lung
31 chr12:26425000-26427400 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr12:26425000-26427400 Weak transcription Colonic Mucosa Colon
33 chr12:26425200-26427000 Weak transcription Primary B cells from peripheral blood blood
34 chr12:26425200-26427600 Enhancers Stomach Smooth Muscle stomach
35 chr12:26425400-26427200 Enhancers Muscle Satellite Cultured Cells --
36 chr12:26425400-26427200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr12:26425400-26427400 Weak transcription Fetal Heart heart
38 chr12:26425400-26427400 Weak transcription Psoas Muscle Psoas
39 chr12:26425400-26428200 Enhancers Brain Inferior Temporal Lobe brain
40 chr12:26425800-26431600 Enhancers Primary hematopoietic stem cells blood
41 chr12:26426000-26428200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr12:26426000-26429800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr12:26426000-26432200 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr12:26426200-26427400 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr12:26426400-26427200 Enhancers Osteobl bone
46 chr12:26426400-26427400 Enhancers NH-A brain
47 chr12:26426400-26429000 Enhancers HSMM muscle
48 chr12:26426400-26429200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr12:26426600-26427400 Enhancers Rectal Mucosa Donor 31 rectum
50 chr12:26426600-26428200 Enhancers Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015